RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 OTUD4Q01804 1114 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 FASTKQ14296 549 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SBK1Q52WX2 424 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 METTL21CQ5VZV1 264 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ATG9AQ7Z3C6 839 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 P4HA3Q7Z4N8 544 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ITFG1Q8TB96 612 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ATG4CQ96DT6 458 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 MAGEB18Q96M61 343 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TUT1Q9H6E5 874 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ABCC13Q9NSE7 274 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 MOCS1Q9NZB8 636 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PTGFRNQ9P2B2 879 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 BARX2Q9UMQ3 279 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SPATA31A3Q5VYP0 1347 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 IRGMA1A4Y4 181 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 A8MX80 341 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ATMINO43313 823 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TLX3O43711 291 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 KERAO60938 352 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PLGP00747 810 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CALB2P22676 271 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 GSSP48637 474 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TGFB2P61812 414 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SULT2A1Q06520 285 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PPIDQ08752 370 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CBX3Q13185 183 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 FSCN1Q16658 493 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PGBD2Q6P3X8 592 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 KCNMB4Q86W47 210 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 RFT1Q96AA3 541 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 DHRS1Q96LJ7 313 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CCT8L2Q96SF2 557 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 LRRC1Q9BTT6 524 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 NUAK2Q9H093 628 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 XPR1Q9UBH6 696 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 DMGDHQ9UI17 866 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TRPV2Q9Y5S1 764 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ITSN1Q15811 1721 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PPP1R37O75864 691 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 LDLRP01130 860 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 GHRP10912 638 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PRKAR2AP13861 404 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TARSP26639 723 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PPM1AP35813 382 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 GYS2P54840 703 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CDC42P60953 191 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SLC39A12Q504Y0 691 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 RTL4Q6ZR62 310 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 FAM98AQ8NCA5 519 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SETD6Q8TBK2 473 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 PTCD2Q8WV60 388 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 NSUN4Q96CB9 384 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 MCRS1Q96EZ8 462 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TCF25Q9BQ70 676 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CST11Q9H112 138 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SNTG2Q9NY99 539 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 GLS2Q9UI32 602 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 KDM6BO15054 1643 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3DA0A087WVF3 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3IA0A087WXS9 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3EA0A087X179 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3KA0A087X1G2 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3FA6NER0 549 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3LB9A6J9 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 DCLK1O15075 740 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 RGL2O15211 777 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SERPINB7O75635 380 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 MATN4O95460 622 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TOP3BO95985 862 aaKnown RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3HP0C7X1 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CPA2P48052 419 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SLC1A6P48664 564 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CLCN3P51790 818 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 UGT2B15P54855 530 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3GQ6DHY5 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3CQ6IPX1 549 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF410Q86VK4 478 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TBC1D3Q8IZP1 549 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 MPP5Q8N3R9 675 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 KYQ8NBH2 561 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ZKSCAN4Q969J2 545 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 EFHD2Q96C19 240 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 KLF6Q99612 283 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 C9orf16Q9BUW7 83 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 HEY2Q9UBP5 337 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CCDC182A6NF36 153 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF185O15231 689 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SRGNP10124 158 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ALAS2P22557 587 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 ME2P23368 584 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 FMO4P31512 558 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 RAP1GAPP47736 663 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 CASP9P55211 416 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 LAMTOR4Q0VGL1 99 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 C4orf46Q504U0 113 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 TMEM86AQ8N2M4 240 aa5.62□□□□□ -1.51
SCN1A-209ENST00000635750 FSTL5Q8N475 847 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-209ENST00000635750 SYN2Q92777 582 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms