RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CWC15Q9P013 229 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 PPM1HQ9ULR3 514 aa14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNRPA1-216ENST00000626000 BTNL10A8MVZ5 291 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 MEI4A8MW99 385 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 DCLK1O15075 740 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 SPOPO43791 374 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 SEMA4FO95754 770 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 IGSF6O95976 241 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF806P0C7X5 589 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 BCKDHBP21953 392 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 CHRNA3P32297 505 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 ACVRL1P37023 503 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 PSMD8P48556 350 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 CREB5Q02930 508 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF33AQ06730 810 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 LPAL2Q16609 132 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 CARD16Q5EG05 197 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 AFMIDQ63HM1 303 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 C11orf63Q6NUN7 778 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 LINGO4Q6UY18 593 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 RHOT1Q8IXI2 618 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 C12orf50Q8NA57 414 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 OR2AP1Q8NGE2 309 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 OR2A12Q8NGT7 310 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 TSC1Q92574 1164 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 ANP32BQ92688 251 aaKnown RBP14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 HMCESQ96FZ2 354 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 GDAP1L1Q96MZ0 367 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF599Q96NL3 588 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 FAM129BQ96TA1 746 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 HEPHQ9BQS7 1158 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 CALN1Q9BXU9 219 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 SP110Q9HB58 689 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 NDFIP2Q9NV92 336 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 UBA2Q9UBT2 640 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 IL36AQ9UHA7 158 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 MBD1Q9UIS9 605 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 INVSQ9Y283 1065 aa14.27□□□□□ -0.13
SNRPA1-216ENST00000626000 RALGAPA1Q6GYQ0 2036 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 PSTPIP1O43586 416 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 PRAMEF11O60813 436 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 RNASEH2AO75792 299 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 POP4O95707 220 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 MT-CO1P00395 513 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 HSPA9P38646 679 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 MAPK8P45983 427 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 RENBPP51606 427 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 IL10RBQ08334 325 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 PEAR1Q5VY43 1037 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 KIAA1328Q86T90 577 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 TMEFF1Q8IYR6 380 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 SPC24Q8NBT2 197 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 OR2T34Q8NGX1 318 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 PIP4K2CQ8TBX8 421 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 HSPA12BQ96MM6 686 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF830Q96NB3 372 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 GPR174Q9BXC1 333 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 MAGEB5Q9BZ81 275 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 SLC6A17Q9H1V8 727 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 ARRDC1-AS1Q9H2J1 176 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 NOL6Q9H6R4 1146 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 SEMA4GQ9NTN9 838 aa14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 EVLQ9UI08 416 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 EP300Q09472 2414 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 PTPRZ1P23471 2315 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-216ENST00000626000 GVINP1Q7Z2Y8 2422 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 CEP192Q8TEP8 1941 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 GPR179Q6PRD1 2367 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 TMEM110-MUSTN1A8MSY1 372 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 METTL12A8MUP2 240 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 KHNYNO15037 678 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 MID1O15344 667 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 BNIP3LO60238 219 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 TMCC1O94876 653 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 MX2P20592 715 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 GLDCP23378 1020 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 DNA2P51530 1060 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 SUOXP51687 545 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 VAV2P52735 878 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 RHOAP61586 193 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 KIF5AQ12840 1032 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 DUOXA1Q1HG43 343 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 PLA2G2CQ5R387 149 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 TIGD7Q6NT04 549 aaPredicted RBP14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 NEK5Q6P3R8 708 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 CACUL1Q86Y37 369 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 HDDC3Q8N4P3 179 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 ATPAF2Q8N5M1 289 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 DNASE2BQ8WZ79 361 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 RAB7BQ96AH8 199 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 FAM131CQ96AQ9 280 aa14.25□□□□□ -0.13
SNRPA1-216ENST00000626000 NUSAP1Q9BXS6 441 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms