RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 LCMT1Q9UIC8 334 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 IGF2RP11717 2491 aa12.71□□□□□ -0.37
LINC00963-217ENST00000624009 ACACAQ13085 2346 aa12.71□□□□□ -0.38
LINC00963-217ENST00000624009 ANKRD11Q6UB99 2663 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-217ENST00000624009 FAM170AA1A519 330 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 TMCO5BA8MYB1 307 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 KDELR3O43731 214 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 DFNA5O60443 496 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 ZNF821O75541 412 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-217ENST00000624009 CER1O95813 267 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 ADRB1P08588 477 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 SKILP12757 684 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 VAV1P15498 845 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 EPHB2P29323 1055 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 CHRNA3P32297 505 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 HCAR3P49019 387 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 ARF5P84085 180 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 GRIK2Q13002 908 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 PIGHQ14442 188 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-217ENST00000624009 POLD3Q15054 466 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-217ENST00000624009 AGBL4Q5VU57 503 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 SCYL2Q6P3W7 929 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 NCEH1Q6PIU2 408 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 HDDC3Q8N4P3 179 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 ZCCHC9Q8N567 271 aaKnown RBP12.7□□□□□ -0.38
LINC00963-217ENST00000624009 MINDY1Q8N5J2 469 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 NIPA2Q8N8Q9 360 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 OR7D4Q8NG98 312 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 PIP4K2CQ8TBX8 421 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 SKA1Q96BD8 255 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 ORAI3Q9BRQ5 295 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 SPON2Q9BUD6 331 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 HDAC8Q9BY41 377 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 PREBQ9HCU5 417 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 PCDHGB2Q9Y5G2 931 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 ANKRD36A6QL64 1941 aa12.7□□□□□ -0.38
LINC00963-217ENST00000624009 SSU72P8A0A1W2PR75 194 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 SMAD6O43541 496 aaKnown RBP12.69□□□□□ -0.38
LINC00963-217ENST00000624009 PRPSAP2O60256 369 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 RNGTTO60942 597 aaKnown RBP12.69□□□□□ -0.38
LINC00963-217ENST00000624009 KCNK5O95279 499 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 CD160O95971 181 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 GSRP00390 522 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 MAOBP27338 520 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 CASP14P31944 242 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 NDST2P52849 883 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 ZNF252P-AS1Q0IIN9 211 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 OVGP1Q12889 678 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 BOLA3Q53S33 107 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 ALKBH5Q6P6C2 394 aaKnown RBP12.69□□□□□ -0.38
LINC00963-217ENST00000624009 PIP4P1Q86T03 277 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 ARFGAP1Q8N6T3 406 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 OR8K1Q8NGG5 319 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 OR14C36Q8NHC7 312 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 MIR1-1HGQ9H1L0 117 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 TM9SF3Q9HD45 589 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 NDFIP2Q9NV92 336 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 IL36AQ9UHA7 158 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 SARDHQ9UL12 918 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 NENFQ9UMX5 172 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 AP4E1Q9UPM8 1137 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 DMTF1Q9Y222 760 aa12.69□□□□□ -0.38
LINC00963-217ENST00000624009 MED19A0JLT2 244 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 K7ERQ8 282 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 VILLO15195 856 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 LRCH4O75427 683 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 FSBPO95073 299 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 CYP1A2P05177 515 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 CTSLP07711 333 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 TPM1P09493 284 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 GLDCP23378 1020 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 ITGB7P26010 798 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 MIPP30301 263 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 TPI1P60174 286 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 SNRPD1P62314 119 aaKnown RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 SERINC3Q13530 473 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 CARD16Q5EG05 197 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 LINGO4Q6UY18 593 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 DBX2Q6ZNG2 339 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 DPY19L3Q6ZPD9 716 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 CYP4V2Q6ZWL3 525 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 IQCHQ86VS3 1027 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 VSTM4Q8IW00 320 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 PYROXD2Q8N2H3 581 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 TEKT4Q8WW24 435 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 SNX19Q92543 992 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 HEPHQ9BQS7 1158 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 GTPBP2Q9BX10 602 aaKnown RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 OSBPL1AQ9BXW6 950 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 NOL6Q9H6R4 1146 aaKnown RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 DYRK4Q9NR20 520 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 ARHGAP20Q9P2F6 1191 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 IP6K2Q9UHH9 426 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms