RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 PTPN7P35236 360 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 NBL1P41271 181 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 RWDD2BP57060 319 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 GALNT2Q10471 571 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 RFTN1Q14699 578 aaPredicted RBP13.75□□□□□ -0.21
MECP2-213ENST00000622433 MAP7D1Q3KQU3 841 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 USP39Q53GS9 565 aaKnown RBP13.75□□□□□ -0.21
MECP2-213ENST00000622433 TFDP3Q5H9I0 405 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 TMCO4Q5TGY1 634 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 KIAA1324Q6UXG2 1013 aaKnown RBP13.75□□□□□ -0.21
MECP2-213ENST00000622433 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 C11orf74Q86VG3 221 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 TP53INP2Q8IXH6 220 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 STK40Q8N2I9 435 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 ATPAF2Q8N5M1 289 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 UBL4BQ8N7F7 174 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 OR2A12Q8NGT7 310 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 GAB3Q8WWW8 586 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 OR8D1Q8WZ84 308 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 HES6Q96HZ4 224 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 ZNF830Q96NB3 372 aaPredicted RBP13.75□□□□□ -0.21
MECP2-213ENST00000622433 ALS2CR12Q96Q35 445 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 SLC6A17Q9H1V8 727 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 SP110Q9HB58 689 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 LZTFL1Q9NQ48 299 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 USP36Q9P275 1121 aaKnown RBP13.75□□□□□ -0.21
MECP2-213ENST00000622433 SCML1Q9UN30 329 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 EFR3BQ9Y2G0 817 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 FCF1Q9Y324 198 aaKnown RBP13.75□□□□□ -0.21
MECP2-213ENST00000622433 ACTL7AQ9Y615 435 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 NYNRINQ9P2P1 1898 aaKnown RBP13.75□□□□□ -0.21
MECP2-213ENST00000622433 CACNA1HO95180 2353 aa13.75□□□□□ -0.21
MECP2-213ENST00000622433 APOL1O14791 398 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 MAFKO60675 156 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 RPP40O75818 363 aaKnown RBP13.74□□□□□ -0.21
MECP2-213ENST00000622433 IGLV3-19P01714 112 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 MX2P20592 715 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 P2RY2P41231 377 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 GARSP41250 739 aaKnown RBP13.74□□□□□ -0.21
MECP2-213ENST00000622433 RECQLP46063 649 aaPredicted RBP13.74□□□□□ -0.21
MECP2-213ENST00000622433 SNRPD1P62314 119 aaKnown RBP13.74□□□□□ -0.21
MECP2-213ENST00000622433 GBE1Q04446 702 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 SFSWAPQ12872 951 aaKnown RBP13.74□□□□□ -0.21
MECP2-213ENST00000622433 CYTH1Q15438 398 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 CARD16Q5EG05 197 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 LEKR1Q6ZMV7 388 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 ARHGAP36Q6ZRI8 547 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 RFX6Q8HWS3 928 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 REXO1L1PQ8IX06 675 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 NETO2Q8NC67 525 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 ALG3Q92685 438 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 FATE1Q969F0 183 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 ERLEC1Q96DZ1 483 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 SPACA7Q96KW9 195 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 TSGA13Q96PP4 275 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 DTLQ9NZJ0 730 aa13.74□□□□□ -0.21
MECP2-213ENST00000622433 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
MECP2-213ENST00000622433 PLXND1Q9Y4D7 1925 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 DDX3YO15523 660 aaKnown RBP13.73□□□□□ -0.21
MECP2-213ENST00000622433 HRO43593 1189 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 PEX11BO96011 259 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 ADH1BP00325 375 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 DNTTP04053 509 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 ACADMP11310 421 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 C5AR1P21730 350 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 TGM2P21980 687 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 CCNCP24863 283 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 CHRNA3P32297 505 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 CETN2P41208 172 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 ZNF33AQ06730 810 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 SLC10A2Q12908 348 aaPredicted RBP13.73□□□□□ -0.21
MECP2-213ENST00000622433 CST6Q15828 149 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 TTC31Q49AM3 519 aaPredicted RBP13.73□□□□□ -0.21
MECP2-213ENST00000622433 FAM46CQ5VWP2 391 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 DPY19L3Q6ZPD9 716 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 MMAAQ8IVH4 418 aaKnown RBP13.73□□□□□ -0.21
MECP2-213ENST00000622433 CCDC50Q8IVM0 306 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 TMIEQ8NEW7 156 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 TRIM58Q8NG06 486 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 OR2AP1Q8NGE2 309 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 HDAC11Q96DB2 347 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 EPC1Q9H2F5 836 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 TNKS2Q9H2K2 1166 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 PABPC3Q9H361 631 aaKnown RBP13.73□□□□□ -0.21
MECP2-213ENST00000622433 LHX3Q9UBR4 397 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 RAPGEFL1Q9UHV5 662 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 PPM1HQ9ULR3 514 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 R4GN57 208 aa13.73□□□□□ -0.21
MECP2-213ENST00000622433 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 C1QTNF3-AMACRE9PGA6 284 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 CST8O60676 142 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 IGSF6O95976 241 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 PRNPP04156 253 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 KRT10P13645 584 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 OXTRP30559 389 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 SLC8A1P32418 973 aa13.72□□□□□ -0.21
MECP2-213ENST00000622433 CSNK1DP48730 415 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms