RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 B3GALNT1O75752 331 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 EDN1P05305 212 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 KRT8P05787 483 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 JUNBP17275 347 aaPredicted RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 NSFP46459 744 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 JAK3P52333 1124 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 MLLT6P55198 1093 aaPredicted RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SRP54P61011 504 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 NOMO3P69849 1222 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 GALK2Q01415 458 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SP4Q02446 784 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF252P-AS1Q0IIN9 211 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 RALGDSQ12967 914 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 NME3Q13232 169 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 MAMLD1Q13495 774 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SNX17Q15036 470 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PGS1Q32NB8 556 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 NEK5Q6P3R8 708 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 BNC2Q6ZN30 1099 aaPredicted RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SH2D5Q6ZV89 423 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 OTOP3Q7RTS5 596 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 KCTD20Q7Z5Y7 419 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PACRGLQ8N7B6 248 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 FAM47BQ8NA70 645 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PDCD6IPQ8WUM4 868 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SLC39A13Q96H72 371 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 METTL2AQ96IZ6 378 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 CEP170P1Q96L14 293 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SLC4A5Q9BY07 1137 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 YTHDF1Q9BYJ9 559 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ADAM33Q9BZ11 813 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 C12orf65Q9H3J6 166 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 POLR1BQ9H9Y6 1135 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PXMP2Q9NR77 195 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ANKEF1Q9NU02 776 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 TBC1D22BQ9NU19 505 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 TXNDC16Q9P2K2 825 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 GABBR1Q9UBS5 961 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 NXF1Q9UBU9 619 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 WBP11Q9Y2W2 641 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 KIAA1217Q5T5P2 1943 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 CLUHO75153 1309 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 OR5K3A6NET4 321 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SNPHO15079 494 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 BET1O15155 118 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PSTPIP1O43586 416 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 RFPL2O75678 378 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 BCAS2O75934 225 aaPredicted RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SEC24DO94855 1032 aaPredicted RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 COX4I1P13073 169 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 YBX3P16989 372 aaKnown RBP eCLIP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PROZP22891 400 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ARL1P40616 181 aaPredicted RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 LEPRP48357 1165 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ACOT2P49753 483 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 MAP3K7CLP57077 242 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 GPX6P59796 221 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 RPL7AP62424 266 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PRKCEQ02156 737 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 GAD2Q05329 585 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 BBS9Q3SYG4 887 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PDPK2PQ6A1A2 396 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 IQSEC1Q6DN90 963 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 TXNRD3NBQ6F5E7 133 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 KIAA0408Q6ZU52 694 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 FRMD7Q6ZUT3 714 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 KATNAL2Q8IYT4 538 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF786Q8N393 782 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 TFB1MQ8WVM0 346 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 VPS33AQ96AX1 596 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 GIMAP5Q96F15 307 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 NRBF2Q96F24 287 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 MAP6Q96JE9 813 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 FEM1CQ96JP0 617 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 EBF4Q9BQW3 602 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 GON7Q9BXV9 100 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF717Q9BY31 904 aaPredicted RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ATP13A3Q9H7F0 1226 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 LIN7BQ9HAP6 207 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 COPG2Q9UBF2 871 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 XPO7Q9UIA9 1087 aaKnown RBP7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF229Q9UJW7 825 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 DNPEPQ9ULA0 475 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 RWDD3Q9Y3V2 267 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 RIPK3Q9Y572 518 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 SRCAPQ6ZRS2 3230 aa7.61□□□□□ -1.19
TRIM49B-202ENST00000622138 ARPC4-TTLL3A0A0A6YYG9 625 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 AURKAO14965 403 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 AKAP10O43572 662 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 LIASO43766 372 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 RGS20O76081 388 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ITGBL1O95965 494 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 C4BPAP04003 597 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 BMP1P13497 986 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PTPN1P18031 435 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 IMPDH1P20839 514 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 GLRA2P23416 452 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms