RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 C2CD4BA6NLJ0 364 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 LGALS16A8MUM7 142 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 LDOC1O95751 146 aaPredicted RBP24.52■■□□□ 1.52
ATXN3-253ENST00000621269 UNGP13051 313 aaPredicted RBP24.52■■□□□ 1.52
ATXN3-253ENST00000621269 ETFBP38117 255 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 PTPN9P43378 593 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 SERPINH1P50454 418 aaKnown RBP24.52■■□□□ 1.52
ATXN3-253ENST00000621269 DNA2P51530 1060 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 RAB6CQ53S08 254 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 ARTNQ5T4W7 220 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 ERN2Q76MJ5 926 aaKnown RBP24.52■■□□□ 1.52
ATXN3-253ENST00000621269 STRADAQ7RTN6 431 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 ARRDC3Q96B67 414 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 PCDHB18PQ96TA0 734 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 SELENOOQ9BVL4 669 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 RAB6CQ9H0N0 254 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 OSBPL2Q9H1P3 480 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 RETREG1Q9H6L5 497 aa24.52■■□□□ 1.52
ATXN3-253ENST00000621269 SEPT11Q9NVA2 429 aaKnown RBP24.52■■□□□ 1.52
ATXN3-253ENST00000621269 A0A1W2PQU0 124 aa24.51■■□□□ 1.51
ATXN3-253ENST00000621269 ZMPSTE24O75844 475 aa24.51■■□□□ 1.51
ATXN3-253ENST00000621269 EPHA8P29322 1005 aaPredicted RBP24.51■■□□□ 1.51
ATXN3-253ENST00000621269 NRG1Q02297 640 aaPredicted RBP24.51■■□□□ 1.51
ATXN3-253ENST00000621269 CLEC16AQ2KHT3 1053 aa24.51■■□□□ 1.51
ATXN3-253ENST00000621269 DPY19L3Q6ZPD9 716 aa24.51■■□□□ 1.51
ATXN3-253ENST00000621269 SPATS2Q86XZ4 545 aaKnown RBP24.51■■□□□ 1.51
ATXN3-253ENST00000621269 EID2Q8N6I1 236 aa24.51■■□□□ 1.51
ATXN3-253ENST00000621269 PCDH20Q8N6Y1 951 aaKnown RBP24.51■■□□□ 1.51
ATXN3-253ENST00000621269 CNDP2Q96KP4 475 aaKnown RBP24.51■■□□□ 1.51
ATXN3-253ENST00000621269 HDAC8Q9BY41 377 aa24.51■■□□□ 1.51
ATXN3-253ENST00000621269 CCDC86Q9H6F5 360 aaKnown RBP24.51■■□□□ 1.51
ATXN3-253ENST00000621269 ENC1O14682 589 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 SLC31A1O15431 190 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 LEFTY1O75610 366 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 PCDH8O95206 1070 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 GJB6O95452 261 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 CALB1P05937 261 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 RHOQP17081 205 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 RXRGP48443 463 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 CARD16Q5EG05 197 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 PROSER1Q86XN7 944 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 PHF13Q86YI8 300 aaPredicted RBP24.5■■□□□ 1.51
ATXN3-253ENST00000621269 FAM172AQ8WUF8 416 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 KLHDC7BQ96G42 594 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 HEPHQ9BQS7 1158 aa24.5■■□□□ 1.51
ATXN3-253ENST00000621269 LRRC10BA6NIK2 292 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 ZNF821O75541 412 aaPredicted RBP24.49■■□□□ 1.51
ATXN3-253ENST00000621269 GPD1P21695 349 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 RFC1P35251 1148 aaPredicted RBP24.49■■□□□ 1.51
ATXN3-253ENST00000621269 MAPKAPK2P49137 400 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 GSCP56915 257 aaPredicted RBP24.49■■□□□ 1.51
ATXN3-253ENST00000621269 ARF5P84085 180 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 PTP4A2Q12974 167 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 BNIP3Q12983 259 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 HORMAD1Q86X24 394 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 CENPIQ92674 756 aaPredicted RBP24.49■■□□□ 1.51
ATXN3-253ENST00000621269 KLK6Q92876 244 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 DNAI1Q9UI46 699 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 HPCAL4Q9UM19 191 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 CA5BQ9Y2D0 317 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 FCF1Q9Y324 198 aaKnown RBP24.49■■□□□ 1.51
ATXN3-253ENST00000621269 WDFY3Q8IZQ1 3526 aa24.49■■□□□ 1.51
ATXN3-253ENST00000621269 MBD3O95983 291 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 CAPNS1P04632 268 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 PLEKP08567 350 aaPredicted RBP24.48■■□□□ 1.51
ATXN3-253ENST00000621269 PRLRP16471 622 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 AKT2P31751 481 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 ACVRL1P37023 503 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 GEMIN4P57678 1058 aaKnown RBP24.48■■□□□ 1.51
ATXN3-253ENST00000621269 SPEGQ15772 3267 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 MANEALQ5VSG8 457 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 DHRS13Q6UX07 377 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 CCDC185Q8N715 623 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 C3orf20Q8ND61 904 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 TBC1D31Q96DN5 1066 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 ERGIC2Q96RQ1 377 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 AGPAT1Q99943 283 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 MYOCQ99972 504 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 TMEM248Q9NWD8 314 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 PCDHGA1Q9Y5H4 931 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 WASF2Q9Y6W5 498 aa24.48■■□□□ 1.51
ATXN3-253ENST00000621269 CXorf51AA0A1B0GTR3 108 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 ANKRD62A6NC57 917 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 FAM72CH0Y354 149 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 RNF103O00237 685 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 TAF4O00268 1085 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 CCDC172P0C7W6 258 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 THEGLP0DJG4 465 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 CDK4P11802 303 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 CCNHP51946 323 aaPredicted RBP24.47■■□□□ 1.51
ATXN3-253ENST00000621269 NEK3P51956 506 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 HDAC4P56524 1084 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 SMAD1Q15797 465 aaKnown RBP24.47■■□□□ 1.51
ATXN3-253ENST00000621269 ZNF284Q2VY69 593 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 CCDC183Q5T5S1 534 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 FAM72AQ5TYM5 149 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 FAM72DQ6L9T8 149 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 FBXL19Q6PCT2 694 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 WDR59Q6PJI9 974 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 NLRP14Q86W24 1093 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms