RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
PDLIM3-212ENST00000620787 SYNJ2BP-COX16A0A087WUM0 186 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 C9IYK1 514 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 GOLGA8TH3BQL2 631 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 PFDN1O60925 122 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 PDGFRBP09619 1106 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 CYP2B6P20813 491 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 GRM5P41594 1212 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 ACADSBP45954 432 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 DCTN2Q13561 401 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 KDM1BQ8NB78 822 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 KCTD4Q8WVF5 259 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 COQ10BQ9H8M1 238 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 CHCHD3Q9NX63 227 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 COX16Q9P0S2 106 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 EPS15L1Q9UBC2 864 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 PCDHGA7Q9Y5G6 932 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 EEF2KO00418 725 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 ZBTB24O43167 697 aaPredicted RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 DDHD2O94830 711 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 SLC35E2BP0CK96 405 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 HSPA1AP0DMV8 641 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 HSPA1BP0DMV9 641 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 CD68P34810 354 aaPredicted RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 HADHAP40939 763 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 ALDH3B2P48448 385 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 ZNF484Q5JVG2 852 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 NOL9Q5SY16 702 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 GK5Q6ZS86 529 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 BNIPLQ7Z465 357 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 ZC3HC1Q86WB0 502 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 CENPLQ8N0S6 344 aaPredicted RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 FSTL5Q8N475 847 aaPredicted RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 FAM149B1Q96BN6 582 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 ZNF512Q96ME7 567 aaPredicted RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 HAUS8Q9BT25 410 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 SEMA6AQ9H2E6 1030 aa19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 RUVBL2Q9Y230 463 aaKnown RBP19.87■□□□□ 0.77
PDLIM3-212ENST00000620787 PAPPA2Q9BXP8 1791 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 TMEM233B4DJY2 109 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 DLX3O60479 287 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 DAB1O75553 588 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 SAT1P21673 171 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 NMBRP28336 390 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 PSMD8P48556 350 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 SCNN1BP51168 640 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 IKBKEQ14164 716 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 DCAF6Q58WW2 860 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 LRRC8EQ6NSJ5 796 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 CARM1Q86X55 608 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 DIS3LQ8TF46 1054 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 MAELQ96JY0 434 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 HSFY1Q96LI6 401 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 CCT7Q99832 543 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 APOL2Q9BQE5 337 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 RHBDL2Q9NX52 303 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 UTP6Q9NYH9 597 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 ERAP1Q9NZ08 941 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 ADA2Q9NZK5 511 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 SUCOQ9UBS9 1254 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 RSL24D1Q9UHA3 163 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 AP4S1Q9Y587 144 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 KCNU1A8MYU2 1149 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 SDHDO14521 159 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 LMO2P25791 158 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 AVPR1AP37288 418 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 ADARP55265 1226 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 PSME3P61289 254 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 MAMDC4Q6UXC1 1216 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 CEP70Q8NHQ1 597 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 LRTOMTQ8WZ04 291 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 C18orf25Q96B23 403 aaPredicted RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 TMIGD2Q96BF3 282 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 TSNARE1Q96NA8 513 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 GBA3Q9H227 469 aa19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 SUDS3Q9H7L9 328 aaPredicted RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 FNDC1Q4ZHG4 1894 aaPredicted RBP19.86■□□□□ 0.77
PDLIM3-212ENST00000620787 ARHGEF37A1IGU5 675 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 MAGEB16A2A368 324 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 TPH1P17752 444 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 NPY2RP49146 381 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 TRIM25Q14258 630 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 USP10Q14694 798 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 TSTD2Q5T7W7 516 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PTAR1Q7Z6K3 402 aaPredicted RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 CRYBG2Q8N1P7 616 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PELI3Q8N2H9 469 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 SLC2A14Q8TDB8 520 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 NT5C3BQ969T7 300 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 NPY6RQ99463 290 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 OSBPL11Q9BXB4 747 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PDGFDQ9GZP0 370 aaPredicted RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 RHOJQ9H4E5 214 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 XPR1Q9UBH6 696 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PDCD11Q14690 1871 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 ERI2A8K979 691 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 FAM72CH0Y354 149 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 H6PDO95479 791 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 GALK1P51570 392 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PPIDQ08752 370 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms