RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 LPGAT1Q92604 370 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF512Q96ME7 567 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 AMBNQ9NP70 447 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF277Q9NRM2 450 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 EIF3KQ9UBQ5 218 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 UGGT1Q9NYU2 1555 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SDC4P31431 198 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SOAT1P35610 550 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 DPYSQ14117 519 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 GOLGA7BQ2TAP0 167 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CACTIN-AS1Q8N1I8 211 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CADM2Q8N3J6 435 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 COQ8AQ8NI60 647 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 RNFT2Q96EX2 444 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CAPN10Q9HC96 672 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 COMMD8Q9NX08 183 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 EDC4Q6P2E9 1401 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 GSAPA4D1B5 854 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ADAMTS3O15072 1205 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 RLN1P04808 185 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CYP1A2P05177 515 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PAEPP09466 180 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PIK3CBP42338 1070 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 KCNJ8Q15842 424 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 C11orf96Q7Z7L8 435 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ASCC1Q8N9N2 400 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 DEDD2Q8WXF8 326 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CAMKK2Q96RR4 588 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 NTN4Q9HB63 628 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM138Q9NPI0 162 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 GPR108Q9NPR9 543 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PROSCO94903 275 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 LRATO95237 230 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 BTN1A1Q13410 526 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PFKFB4Q16877 469 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 C21orf62-AS1Q17RA5 79 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CCDC58Q4VC31 144 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 DCAF12L1Q5VU92 463 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 GCNT7Q6ZNI0 430 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 FAM35AQ86V20 835 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TEX12Q9BXU0 123 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PSMD13Q9UNM6 376 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PPIEQ9UNP9 301 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TNRQ92752 1358 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 G3V2T6 193 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 VILLO15195 856 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 LYPLA2O95372 231 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ITGB6P18564 788 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ITIH1P19827 911 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 RPL22P35268 128 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TAS2R40P59535 323 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 FBXO33Q7Z6M2 555 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 LRRC57Q8N9N7 239 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 S100PBPQ96BU1 408 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 MIPEPQ99797 713 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 DENND4BO75064 1496 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ABCC10Q5T3U5 1492 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SALL1Q9NSC2 1324 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 OPRL1P41146 370 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 RPS3AP61247 264 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 FAM98BQ52LJ0 330 aaKnown RBP5.1□□□□□ -1.59
VPS13D-214ENST00000620676 AFTPHQ6ULP2 937 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ASB18Q6ZVZ8 466 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 AHSA2Q719I0 299 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 SCN4BQ8IWT1 228 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 C12orf56Q8IXR9 622 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 NKX2-3Q8TAU0 364 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 NMRAL1Q9HBL8 299 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 KRT84Q9NSB2 600 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 POLIQ9UNA4 740 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 KRBA1A5PL33 1030 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 S100A6P06703 90 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CXCR3P49682 368 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PRKCQQ04759 706 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 KLF10Q13118 480 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PLEKHG6Q3KR16 790 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ZDHHC24Q6UX98 284 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ZBTB8OSQ8IWT0 167 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF540Q8NDQ6 660 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 DIRAS2Q96HU8 199 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 PCDHB18PQ96TA0 734 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 TBX20Q9UMR3 447 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 ABCG2Q9UNQ0 655 aa5.1□□□□□ -1.59
VPS13D-214ENST00000620676 CES1P23141 567 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 DGKEP52429 567 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 EN1Q05925 392 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PMS2P3Q13401 168 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 PRKD1Q15139 912 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 POTEHQ6S545 545 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 RASAL3Q86YV0 1011 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GATAD2BQ8WXI9 593 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 FOXP3Q9BZS1 431 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 NOD1Q9Y239 953 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 SLC35F4A4IF30 521 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ASB14A6NK59 587 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GAS2O43903 313 aaKnown RBP5.09□□□□□ -1.59
VPS13D-214ENST00000620676 CD97P48960 835 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF45Q02386 682 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GPR68Q15743 365 aa5.09□□□□□ -1.59
VPS13D-214ENST00000620676 GPATCH4Q5T3I0 446 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms