RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 RHOAP61586 193 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 ARHGAP17Q68EM7 881 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 TRIM69Q86WT6 500 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 SLC44A2Q8IWA5 706 aaPredicted RBP8.46□□□□□ -1.06
ALMS1-208ENST00000620466 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.06
ALMS1-208ENST00000620466 PADI4Q9UM07 663 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 NFS1Q9Y697 457 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 HPGDP15428 266 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 LRPAP1P30533 357 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 FOXN2P32314 431 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 ZC3H3Q8IXZ2 948 aaKnown RBP8.46□□□□□ -1.06
ALMS1-208ENST00000620466 FBXW8Q8N3Y1 598 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 ANKRD52Q8NB46 1076 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 PCSK9Q8NBP7 692 aaKnown RBP8.46□□□□□ -1.06
ALMS1-208ENST00000620466 PPP1R14AQ96A00 147 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 EXOSC4Q9NPD3 245 aaKnown RBP8.46□□□□□ -1.06
ALMS1-208ENST00000620466 THG1LQ9NWX6 298 aaKnown RBP8.46□□□□□ -1.06
ALMS1-208ENST00000620466 NPR3P17342 541 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 MSH3P20585 1137 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 GUCA1AP43080 201 aaPredicted RBP8.46□□□□□ -1.06
ALMS1-208ENST00000620466 TBX4P57082 545 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 RUNX1T1Q06455 604 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 SQLEQ14534 574 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 WSCD1Q658N2 575 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 AAGABQ6PD74 315 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 FBXO39Q8N4B4 442 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 SPATA6LQ8N4H0 392 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 CAMKK2Q96RR4 588 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 KRT84Q9NSB2 600 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 TRPM5Q9NZQ8 1165 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 OR12D3Q9UGF7 316 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 FBXL21Q9UKT6 434 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 EFR3BQ9Y2G0 817 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 TIAM2Q8IVF5 1701 aa8.46□□□□□ -1.06
ALMS1-208ENST00000620466 BAZ2AQ9UIF9 1905 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RGSL1A5PLK6 1076 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 INPP4BO15327 924 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CILPO75339 1184 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 AMHP03971 560 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 FOLH1Q04609 750 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RFWD3Q6PCD5 774 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 DAW1Q8N136 415 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 FIG4Q92562 907 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 NLNQ9BYT8 704 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 ARHGEF3Q9NR81 526 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CHKBQ9Y259 395 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 SNX8Q9Y5X2 465 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CXCL11O14625 94 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TGDSO95455 350 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 BDNFP23560 247 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 KLRC2P26717 231 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 SAMD4BQ5PRF9 694 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 LPCAT4Q643R3 524 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 B3GNT6Q6ZMB0 384 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 MARK2Q7KZI7 788 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CLVS1Q8IUQ0 354 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 LPCAT1Q8NF37 534 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 OMDQ99983 421 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 SLC25A23Q9BV35 468 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 DENND2DQ9H6A0 471 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 COMMD8Q9NX08 183 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PLA2G4CQ9UP65 541 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TDRKHQ9Y2W6 561 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PSMD12O00232 456 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TSPAN3O60637 253 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CKMP06732 381 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PIK3R1P27986 724 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TREML2Q5T2D2 321 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 MTSS1LQ765P7 747 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CMC1Q7Z7K0 106 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RP9Q8TA86 221 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CASP10Q92851 521 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 GLMNQ92990 594 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 AHCYL2Q96HN2 611 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 C7orf26Q96N11 449 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 ADGRE3Q9BY15 652 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TMEM245Q9H330 911 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 ALG9Q9H6U8 611 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 S100A14Q9HCY8 104 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PAIP2BQ9ULR5 123 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RAP2CQ9Y3L5 183 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RAD54BQ9Y620 910 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 MYH2Q9UKX2 1941 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TK2O00142 265 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 NBNO60934 754 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 LTA4HP09960 611 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 GTF2E2P29084 291 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 NAGLUP54802 743 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TRAF2Q12933 501 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 USP4Q13107 963 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TRIM16LQ309B1 348 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CCDC92Q53HC0 331 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 LIPMQ5VYY2 423 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 OVOS1Q6IE37 1185 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 LZTR1Q8N653 840 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CSGALNACT1Q8TDX6 532 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RCN3Q96D15 328 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms