RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TTC34A8MYJ7 566 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3LB9A6J9 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 RNF225M0QZC1 329 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 ERVH48-1M5A8F1 160 aa8.79□□□□□ -1
GPC6-202ENST00000617456 KIF2AO00139 706 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 OPA1O60313 960 aa8.79□□□□□ -1
GPC6-202ENST00000617456 MT-CO3P00414 261 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3HP0C7X1 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 SLC2A3P11169 496 aa8.79□□□□□ -1
GPC6-202ENST00000617456 KRT10P13645 584 aa8.79□□□□□ -1
GPC6-202ENST00000617456 ERCC5P28715 1186 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 MAT2AP31153 395 aaKnown RBP8.79□□□□□ -1
GPC6-202ENST00000617456 SLC6A4P31645 630 aa8.79□□□□□ -1
GPC6-202ENST00000617456 SLC8A1P32418 973 aa8.79□□□□□ -1
GPC6-202ENST00000617456 CTSOP43234 321 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 NUMBP49757 651 aa8.79□□□□□ -1
GPC6-202ENST00000617456 CCR5P51681 352 aa8.79□□□□□ -1
GPC6-202ENST00000617456 PPP2CBP62714 309 aa8.79□□□□□ -1
GPC6-202ENST00000617456 PPP2CAP67775 309 aa8.79□□□□□ -1
GPC6-202ENST00000617456 DAB2P98082 770 aa8.79□□□□□ -1
GPC6-202ENST00000617456 LRMPQ12912 555 aa8.79□□□□□ -1
GPC6-202ENST00000617456 ILKQ13418 452 aa8.79□□□□□ -1
GPC6-202ENST00000617456 SLC12A1Q13621 1099 aa8.79□□□□□ -1
GPC6-202ENST00000617456 LY6DQ14210 128 aa8.79□□□□□ -1
GPC6-202ENST00000617456 DBN1Q16643 649 aa8.79□□□□□ -1
GPC6-202ENST00000617456 HNRNPA1L2Q32P51 320 aaKnown RBP8.79□□□□□ -1
GPC6-202ENST00000617456 C9orf64Q5T6V5 341 aa8.79□□□□□ -1
GPC6-202ENST00000617456 PIK3R6Q5UE93 754 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3GQ6DHY5 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3CQ6IPX1 549 aa8.79□□□□□ -1
GPC6-202ENST00000617456 GBP6Q6ZN66 633 aa8.79□□□□□ -1
GPC6-202ENST00000617456 PCGF5Q86SE9 256 aa8.79□□□□□ -1
GPC6-202ENST00000617456 SPATS2Q86XZ4 545 aaKnown RBP8.79□□□□□ -1
GPC6-202ENST00000617456 MFN1Q8IWA4 741 aa8.79□□□□□ -1
GPC6-202ENST00000617456 FAM114A1Q8IWE2 563 aa8.79□□□□□ -1
GPC6-202ENST00000617456 TBC1D3Q8IZP1 549 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 CARNMT1Q8N4J0 409 aa8.79□□□□□ -1
GPC6-202ENST00000617456 FIBINQ8TAL6 211 aa8.79□□□□□ -1
GPC6-202ENST00000617456 FAM76AQ8TAV0 307 aa8.79□□□□□ -1
GPC6-202ENST00000617456 UBA3Q8TBC4 463 aa8.79□□□□□ -1
GPC6-202ENST00000617456 ZNF606Q8WXB4 792 aa8.79□□□□□ -1
GPC6-202ENST00000617456 MYO19Q96H55 970 aa8.79□□□□□ -1
GPC6-202ENST00000617456 SLC39A13Q96H72 371 aa8.79□□□□□ -1
GPC6-202ENST00000617456 DHRS1Q96LJ7 313 aa8.79□□□□□ -1
GPC6-202ENST00000617456 ZSWIM1Q9BR11 485 aa8.79□□□□□ -1
GPC6-202ENST00000617456 SEMA4CQ9C0C4 833 aa8.79□□□□□ -1
GPC6-202ENST00000617456 THAP9Q9H5L6 903 aa8.79□□□□□ -1
GPC6-202ENST00000617456 APEX2Q9UBZ4 518 aa8.79□□□□□ -1
GPC6-202ENST00000617456 ADAMTS1Q9UHI8 967 aa8.79□□□□□ -1
GPC6-202ENST00000617456 DACH1Q9UI36 760 aa8.79□□□□□ -1
GPC6-202ENST00000617456 MCM8Q9UJA3 840 aa8.79□□□□□ -1
GPC6-202ENST00000617456 PCDHGC3Q9UN70 934 aa8.79□□□□□ -1
GPC6-202ENST00000617456 PCDHB1Q9Y5F3 818 aa8.79□□□□□ -1
GPC6-202ENST00000617456 PIEZO2Q9H5I5 2752 aa8.79□□□□□ -1
GPC6-202ENST00000617456 COL5A1P20908 1838 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 TP53BP1Q12888 1972 aaPredicted RBP8.79□□□□□ -1
GPC6-202ENST00000617456 M0QYV0 167 aa8.78□□□□□ -1
GPC6-202ENST00000617456 PIK3R2O00459 728 aa8.78□□□□□ -1
GPC6-202ENST00000617456 TRIM38O00635 465 aa8.78□□□□□ -1
GPC6-202ENST00000617456 SIGLEC6O43699 453 aa8.78□□□□□ -1
GPC6-202ENST00000617456 ACSL4O60488 711 aa8.78□□□□□ -1
GPC6-202ENST00000617456 GADD45BO75293 160 aaPredicted RBP8.78□□□□□ -1
GPC6-202ENST00000617456 ASLP04424 464 aa8.78□□□□□ -1
GPC6-202ENST00000617456 MPOP05164 745 aa8.78□□□□□ -1
GPC6-202ENST00000617456 LCP1P13796 627 aa8.78□□□□□ -1
GPC6-202ENST00000617456 GOT1P17174 413 aa8.78□□□□□ -1
GPC6-202ENST00000617456 TPP2P29144 1249 aaPredicted RBP8.78□□□□□ -1
GPC6-202ENST00000617456 RXRGP48443 463 aa8.78□□□□□ -1
GPC6-202ENST00000617456 ADPRHP54922 357 aa8.78□□□□□ -1
GPC6-202ENST00000617456 OXCT1P55809 520 aa8.78□□□□□ -1
GPC6-202ENST00000617456 TBX4P57082 545 aa8.78□□□□□ -1
GPC6-202ENST00000617456 PCBP4P57723 403 aaKnown RBP8.78□□□□□ -1
GPC6-202ENST00000617456 TMPRSS3P57727 454 aa8.78□□□□□ -1
GPC6-202ENST00000617456 BPIFB4P59827 614 aa8.78□□□□□ -1
GPC6-202ENST00000617456 RPS24P62847 133 aaKnown RBP8.78□□□□□ -1
GPC6-202ENST00000617456 YWHAZP63104 245 aaKnown RBP8.78□□□□□ -1
GPC6-202ENST00000617456 GABREP78334 506 aa8.78□□□□□ -1
GPC6-202ENST00000617456 RHDQ02161 417 aa8.78□□□□□ -1
GPC6-202ENST00000617456 EIF4EBP2Q13542 120 aaPredicted RBP8.78□□□□□ -1
GPC6-202ENST00000617456 EXOC3L4Q17RC7 722 aa8.78□□□□□ -1
GPC6-202ENST00000617456 POM121L1PQ3SYA9 428 aa8.78□□□□□ -1
GPC6-202ENST00000617456 KBTBD12Q3ZCT8 623 aa8.78□□□□□ -1
GPC6-202ENST00000617456 EFHC1Q5JVL4 640 aa8.78□□□□□ -1
GPC6-202ENST00000617456 TTC39BQ5VTQ0 682 aaPredicted RBP8.78□□□□□ -1
GPC6-202ENST00000617456 ISM2Q6H9L7 571 aa8.78□□□□□ -1
GPC6-202ENST00000617456 TRIM65Q6PJ69 517 aa8.78□□□□□ -1
GPC6-202ENST00000617456 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.78□□□□□ -1
GPC6-202ENST00000617456 SND1Q7KZF4 910 aaKnown RBP eCLIP8.78□□□□□ -15e-8■■■□□ 17.9
GPC6-202ENST00000617456 RRAGAQ7L523 313 aa8.78□□□□□ -1
GPC6-202ENST00000617456 ZDHHC17Q8IUH5 632 aa8.78□□□□□ -1
GPC6-202ENST00000617456 CCDC117Q8IWD4 279 aaPredicted RBP8.78□□□□□ -1
GPC6-202ENST00000617456 STK40Q8N2I9 435 aa8.78□□□□□ -1
GPC6-202ENST00000617456 OXR1Q8N573 874 aa8.78□□□□□ -1
GPC6-202ENST00000617456 AADATQ8N5Z0 425 aa8.78□□□□□ -1
GPC6-202ENST00000617456 DCBLD1Q8N8Z6 715 aa8.78□□□□□ -1
GPC6-202ENST00000617456 FAM181AQ8N9Y4 354 aa8.78□□□□□ -1
GPC6-202ENST00000617456 HJURPQ8NCD3 748 aaPredicted RBP8.78□□□□□ -1
GPC6-202ENST00000617456 ZNF248Q8NDW4 579 aa8.78□□□□□ -1
GPC6-202ENST00000617456 RFFLQ8WZ73 363 aa8.78□□□□□ -1
GPC6-202ENST00000617456 TTC17Q96AE7 1141 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms