RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ACSL4O60488 711 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 RAMP2O60895 175 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 MT-ND3P03897 115 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 PIRTP0C851 137 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 BMP1P13497 986 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 RHOQP17081 205 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 GABRR2P28476 465 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 RAB33AQ14088 237 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 FSCBQ5H9T9 825 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 TMEM240Q5SV17 173 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 NUGGCQ68CJ6 796 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 IL31Q6EBC2 164 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 LVRNQ6Q4G3 990 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 LINGO4Q6UY18 593 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 GAREM2Q75VX8 874 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 RBM23Q86U06 439 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 TDRPQ86YL5 185 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 CMTR2Q8IYT2 770 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 C2orf15Q8WU43 125 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 CHMP6Q96FZ7 201 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 ZNF317Q96PQ6 595 aaPredicted RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 SMIM14Q96QK8 99 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SP110Q9HB58 689 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 GLOD4Q9HC38 313 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 TMEM248Q9NWD8 314 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SAMD15Q9P1V8 674 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 ZNF212Q9UDV6 495 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 FAM107AO95990 144 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 HDCP19113 662 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SAT1P21673 171 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 IRS1P35568 1242 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SMAD3P84022 425 aaKnown RBP7.93□□□□□ -1.14
NEK3-207ENST00000617054 NIPAL4Q0D2K0 466 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 DNAJC3Q13217 504 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 PTPRRQ15256 657 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 C4orf22Q6V702 233 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 SLC26A11Q86WA9 606 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 ACVR1CQ8NER5 493 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 ENTPD7Q9NQZ7 604 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 NKIRAS1Q9NYS0 192 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 MOCS1Q9NZB8 636 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 TRHDEQ9UKU6 1024 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 MYOFQ9NZM1 2061 aa7.93□□□□□ -1.14
NEK3-207ENST00000617054 TYROBPO43914 113 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 DRD4P21917 467 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 PRKCHP24723 683 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 EPHB3P54753 998 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 FPGSQ05932 587 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 PTPRCAPQ14761 206 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 VEPH1Q14D04 833 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 PPM1JQ5JR12 505 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 MARC1Q5VT66 337 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 AFMIDQ63HM1 303 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 TPGS1Q6ZTW0 290 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 UMODL1-AS1Q8N2C9 162 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 LZTR1Q8N653 840 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 TSGA13Q96PP4 275 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 FAM111AQ96PZ2 611 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 TGS1Q96RS0 853 aaKnown RBP7.92□□□□□ -1.14
NEK3-207ENST00000617054 IL12RB2Q99665 862 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 CORO1BQ9BR76 489 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 MECRQ9BV79 373 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 FSD1LQ9BXM9 530 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 MCOLN1Q9GZU1 580 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 CAB39LQ9H9S4 337 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 PRDM16Q9HAZ2 1276 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 BFARQ9NZS9 450 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 MYO15AQ9UKN7 3530 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 IGLV3-10A0A075B6K4 115 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 DRGXA6NNA5 263 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 CBX4O00257 560 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 LILRB3O75022 631 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 POLBP06746 335 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 MYL4P12829 197 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 CCR2P41597 374 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 COG7P83436 770 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 SEPT6Q14141 434 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 TPGS2Q68CL5 300 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 ITPRIPL1Q6GPH6 555 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 DENND5AQ6IQ26 1287 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 NSMCE3Q96MG7 304 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 HERC2P3Q9BVR0 1158 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 ZBP1Q9H171 429 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 CASS4Q9NQ75 786 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 PCMTD2Q9NV79 361 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 RAD54BQ9Y620 910 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 CPQQ9Y646 472 aa7.92□□□□□ -1.14
NEK3-207ENST00000617054 ZCWPW2A0A1B0GU75 182 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 FAM159BA6NKW6 160 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 LPXNO60711 386 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 ASMTLO95671 621 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 OAS1P00973 400 aaKnown RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 F11P03951 625 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 C8AP07357 584 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 PGAM1P18669 254 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SP100P23497 879 aaPredicted RBP7.91□□□□□ -1.14
NEK3-207ENST00000617054 CTNNB1P35222 781 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 SLC11A2P49281 568 aa7.91□□□□□ -1.14
NEK3-207ENST00000617054 CDK16Q00536 496 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms