RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PIK3R6Q5UE93 754 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 WDR59Q6PJI9 974 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 BHLHA9Q7RTU4 235 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 PIGZQ86VD9 579 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 STK40Q8N2I9 435 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 CHP1Q99653 195 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 UBE2TQ9NPD8 197 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 CISHQ9NSE2 258 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 STARD5Q9NSY2 213 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 STIM2Q9P246 746 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 DMTF1Q9Y222 760 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 FHOD1Q9Y613 1164 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 MSI1O43347 362 aaKnown RBP18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 SUV39H1O43463 412 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 ZBED1O96006 694 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 ADH1BP00325 375 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 IL1BP01584 269 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 GP1BAP07359 652 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 DRD3P35462 400 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 EIF4A3P38919 411 aaKnown RBP18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 PRKCIP41743 596 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 CTSOP43234 321 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 METAP1P53582 386 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 CUL2Q13617 745 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 POM121L1PQ3SYA9 428 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 ZNF662Q6ZS27 426 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 MFN1Q8IWA4 741 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 KDM1BQ8NB78 822 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 MAPK15Q8TD08 544 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 EDEM1Q92611 657 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 KAT5Q92993 513 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 KLHDC7BQ96G42 594 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 ATXN7L3BQ96GX2 97 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 PRR11Q96HE9 360 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 APOLD1Q96LR9 279 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 ULBP1Q9BZM6 244 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 OLA1Q9NTK5 396 aaKnown RBP18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 TJP2Q9UDY2 1190 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 ERVW-1Q9UQF0 538 aa18.08■□□□□ 0.49
TRAPPC3-209ENST00000616395 LY6G6EA0A0G2JKS1 128 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 EDDM13A0A1B0GTR0 161 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 PMS2P1A4D2B8 440 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 EFSO43281 561 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 LZTS3O60299 673 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 RTN2O75298 545 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 TBXAS1P24557 533 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 MZF1P28698 734 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 SLC6A4P31645 630 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 TKTL1P51854 596 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 BPIFB4P59827 614 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 DRAP1Q14919 205 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 PM20D1Q6GTS8 502 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 PPM1KQ8N3J5 372 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 SLC4A11Q8NBS3 891 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 FIBINQ8TAL6 211 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 RNF139Q8WU17 664 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 CCNL2Q96S94 520 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 DESI2Q9BSY9 194 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 UBXN6Q9BZV1 441 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 SIX2Q9NPC8 291 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 SLCO3A1Q9UIG8 710 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 U3KQA8 63 aa18.07■□□□□ 0.48
TRAPPC3-209ENST00000616395 UNC79Q9P2D8 2635 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 CDRT15L2A8MXV6 281 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 F8VZ95 297 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 PRAMEF26H0Y7S4 382 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 PIAS2O75928 621 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 CALCAP01258 141 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 NUDT1P36639 197 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 RAD23BP54727 409 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 JAM2P57087 298 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 YWHAEP62258 255 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 ETF1P62495 437 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 IFI16Q16666 785 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 ARHGAP44Q17R89 818 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 FOXR1Q6PIV2 292 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 NYAP1Q6ZVC0 841 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 ARHGEF19Q8IW93 802 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 REXO1L1PQ8IX06 675 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 ZNF557Q8N988 423 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 IFI44Q8TCB0 444 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 HEXIM2Q96MH2 286 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 KLHL11Q9NVR0 708 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 WDR70Q9NW82 654 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 PCDHGA8Q9Y5G5 932 aa18.06■□□□□ 0.48
TRAPPC3-209ENST00000616395 LCA5LO95447 670 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 SRPRAP08240 638 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 THEGLP0DJG4 465 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 ALPPL2P10696 532 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 GP1BBP13224 206 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 ITGB6P18564 788 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 TGM2P21980 687 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 CASQ1P31415 396 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 MAGEA1P43355 309 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 VAV2P52735 878 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 GNG11P61952 73 aa18.05■□□□□ 0.48
TRAPPC3-209ENST00000616395 GCNT1Q02742 428 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms