RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 AIM2O14862 343 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 HDAC3O15379 428 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 TADA2AO75478 443 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 ZMPSTE24O75844 475 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 PFKMP08237 780 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 ME2P23368 584 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 SCNN1AP37088 669 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 PPARGP37231 505 aaPredicted RBP11.4□□□□□ -0.59
ATF3-211ENST00000613954 ARL4AP40617 200 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 PNPLA4P41247 253 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 RGS7P49802 495 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 LIMK2P53671 638 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 USP46P62068 366 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 HPCAP84074 193 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 USP4Q13107 963 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 PEX6Q13608 980 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 RFTN1Q14699 578 aaPredicted RBP11.4□□□□□ -0.59
ATF3-211ENST00000613954 ZNF423Q2M1K9 1284 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 PIGGQ5H8A4 983 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 PPM1JQ5JR12 505 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 FAM182AQ5T1J6 154 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 DSELQ8IZU8 1212 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 METTL25Q8N6Q8 603 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 EFCAB3Q8N7B9 438 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 ZNF784Q8NCA9 323 aaPredicted RBP11.4□□□□□ -0.59
ATF3-211ENST00000613954 ARRDC4Q8NCT1 418 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 RDH11Q8TC12 318 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 CENPIQ92674 756 aaPredicted RBP11.4□□□□□ -0.59
ATF3-211ENST00000613954 PREBQ9HCU5 417 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 HMX1Q9NP08 348 aaPredicted RBP11.4□□□□□ -0.59
ATF3-211ENST00000613954 MRPL40Q9NQ50 206 aaKnown RBP11.4□□□□□ -0.59
ATF3-211ENST00000613954 FAM105AQ9NUU6 356 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 MTMR10Q9NXD2 777 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 SAGE1Q9NXZ1 904 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 SLC17A6Q9P2U8 582 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 VTI1BQ9UEU0 232 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 NOD1Q9Y239 953 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 RAP2CQ9Y3L5 183 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 SNX9Q9Y5X1 595 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 PSAT1Q9Y617 370 aa11.4□□□□□ -0.59
ATF3-211ENST00000613954 TRIP11Q15643 1979 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 MATN2O00339 956 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 SERPINB5P36952 375 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 HADHAP40939 763 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 GLUD2P49448 558 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 MRPS22P82650 360 aaKnown RBP11.39□□□□□ -0.59
ATF3-211ENST00000613954 MYBPC3Q14896 1274 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 FAM26DQ5JW98 314 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 FBXO47Q5MNV8 452 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 SEL1L3Q68CR1 1132 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 NCBP2-AS2Q69YL0 99 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 PMF1Q6P1K2 205 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 SNX32Q86XE0 403 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 DCLK2Q8N568 766 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 ZFP28Q8NHY6 868 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 ZNF296Q8WUU4 475 aaPredicted RBP11.39□□□□□ -0.59
ATF3-211ENST00000613954 KBTBD7Q8WVZ9 684 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
ATF3-211ENST00000613954 CNBD2Q96M20 576 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 CDRT15Q96T59 188 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 GRIP2Q9C0E4 1043 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 LRRC40Q9H9A6 602 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 EFCAB1Q9HAE3 211 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 MRGBPQ9NV56 204 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 RNF19AQ9NV58 838 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 EPS15L1Q9UBC2 864 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 RPS6KL1Q9Y6S9 549 aa11.39□□□□□ -0.59
ATF3-211ENST00000613954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 G3V2L1 256 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 TIMM44O43615 452 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 PFDN1O60925 122 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 BCAS2O75934 225 aaPredicted RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 GRK4P32298 578 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 RPL14P50914 215 aaKnown RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 CRADDP78560 199 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 MYBPC1Q00872 1141 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 SOX4Q06945 474 aaPredicted RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 TRIM71Q2Q1W2 868 aaKnown RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 MYLK3Q32MK0 819 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 PKDCCQ504Y2 493 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 LHX8Q68G74 356 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 CLEC14AQ86T13 490 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 PSTKQ8IV42 348 aaKnown RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 PDCD6IPQ8WUM4 868 aaKnown RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 OR52B2Q96RD2 323 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 KCTD15Q96SI1 283 aaPredicted RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 PRPF18Q99633 342 aaKnown RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 C11orf84Q9BUA3 381 aaPredicted RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 AGO3Q9H9G7 860 aaKnown RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 NMRAL1Q9HBL8 299 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 MAN1C1Q9NR34 630 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 TRMT13Q9NUP7 481 aaKnown RBP11.38□□□□□ -0.59
ATF3-211ENST00000613954 OXSMQ9NWU1 459 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 SYBUQ9NX95 663 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 GDAP2Q9NXN4 497 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 IGSF9Q9P2J2 1179 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 A0A096LPK6 155 aa11.38□□□□□ -0.59
ATF3-211ENST00000613954 PRSS51A0A1B0GVH4 220 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms