RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CXorf51AA0A1B0GTR3 108 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 FAM221BA6H8Z2 402 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 ANKRD62A6NC57 917 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 RHOQP17081 205 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 RFC1P35251 1148 aaPredicted RBP23.22■■□□□ 1.31
FAM228B-208ENST00000613899 HDAC4P56524 1084 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 SETMARQ53H47 684 aaPredicted RBP23.22■■□□□ 1.31
FAM228B-208ENST00000613899 PIP5KL1Q5T9C9 394 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 RWDD4Q6NW29 188 aaKnown RBP23.22■■□□□ 1.31
FAM228B-208ENST00000613899 DNAJC24Q6P3W2 148 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 PCDH20Q8N6Y1 951 aaKnown RBP23.22■■□□□ 1.31
FAM228B-208ENST00000613899 TBC1D31Q96DN5 1066 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 TMEM248Q9NWD8 314 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 ARHGAP20Q9P2F6 1191 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 IL36AQ9UHA7 158 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 BTBD3Q9Y2F9 522 aa23.22■■□□□ 1.31
FAM228B-208ENST00000613899 SIGLEC16A6NMB1 481 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 MAGEC1O60732 1142 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 ZMPSTE24O75844 475 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 KRT37O76014 449 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 MAT2AP31153 395 aaKnown RBP23.21■■□□□ 1.31
FAM228B-208ENST00000613899 IL9RQ01113 521 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 NEK5Q6P3R8 708 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 WDR59Q6PJI9 974 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 IQCHQ86VS3 1027 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 OXR1Q8N573 874 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 CCDC185Q8N715 623 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 PNPLA1Q8N8W4 532 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 MFSD2AQ8NA29 543 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 KDF1Q8NAX2 398 aaPredicted RBP23.21■■□□□ 1.31
FAM228B-208ENST00000613899 TNKS2Q9H2K2 1166 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 MYO6Q9UM54 1294 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 IGF2RP11717 2491 aa23.21■■□□□ 1.31
FAM228B-208ENST00000613899 COL5A1P20908 1838 aaPredicted RBP23.2■■□□□ 1.3
FAM228B-208ENST00000613899 SMTNL1A8MU46 457 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 TLR4O00206 839 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 WNT9AO14904 365 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 LRIG2O94898 1065 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 PLEKP08567 350 aaPredicted RBP23.2■■□□□ 1.3
FAM228B-208ENST00000613899 DESP17661 470 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 ARRB1P49407 418 aaPredicted RBP23.2■■□□□ 1.3
FAM228B-208ENST00000613899 GEMIN4P57678 1058 aaKnown RBP23.2■■□□□ 1.3
FAM228B-208ENST00000613899 NXPH1P58417 271 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 ARF5P84085 180 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 SCAPQ12770 1279 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 OVGP1Q12889 678 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 PPP1R2P3Q6NXS1 205 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 DPY19L3Q6ZPD9 716 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 NLRP14Q86W24 1093 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 CHST14Q8NCH0 376 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 GRIN3AQ8TCU5 1115 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 ARRDC3Q96B67 414 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 NEU3Q9UQ49 428 aa23.2■■□□□ 1.3
FAM228B-208ENST00000613899 PRAMEF26H0Y7S4 382 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 TNFSF14O43557 240 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 ZNF143P52747 638 aaPredicted RBP23.19■■□□□ 1.3
FAM228B-208ENST00000613899 TAS2R38P59533 333 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 ERN2Q76MJ5 926 aaKnown RBP23.19■■□□□ 1.3
FAM228B-208ENST00000613899 SLFN11Q7Z7L1 901 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 SLCO6A1Q86UG4 719 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 MCEEQ96PE7 176 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 HDAC8Q9BY41 377 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 MAGEH1Q9H213 219 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 ERVMER34-1Q9H9K5 563 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 RTN4Q9NQC3 1192 aaKnown RBP23.19■■□□□ 1.3
FAM228B-208ENST00000613899 DNAI1Q9UI46 699 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 HPCAL4Q9UM19 191 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 DOCK9Q9BZ29 2069 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 AKAP13Q12802 2813 aa23.19■■□□□ 1.3
FAM228B-208ENST00000613899 TCRBV5S1A1TA0A578 114 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 FAM72CH0Y354 149 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 CCP110O43303 1012 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 RAMP2O60895 175 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 RNGTTO60942 597 aaKnown RBP23.18■■□□□ 1.3
FAM228B-208ENST00000613899 ZNF821O75541 412 aaPredicted RBP23.18■■□□□ 1.3
FAM228B-208ENST00000613899 LEFTY1O75610 366 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 STAT4Q14765 748 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 FILIP1LQ4L180 1135 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 ARSIQ5FYB1 569 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 EFHC2Q5JST6 749 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 FAM72AQ5TYM5 149 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 ACAD10Q6JQN1 1059 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 FAM72DQ6L9T8 149 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 FAM72BQ86X60 149 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 ARHGEF2Q92974 986 aaKnown RBP23.18■■□□□ 1.3
FAM228B-208ENST00000613899 ISG20Q96AZ6 181 aaKnown RBP23.18■■□□□ 1.3
FAM228B-208ENST00000613899 HEPHQ9BQS7 1158 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 NDFIP2Q9NV92 336 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 TOR4AQ9NXH8 423 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 FTSJ1Q9UET6 329 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 ZMIZ1Q9ULJ6 1067 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 FCF1Q9Y324 198 aaKnown RBP23.18■■□□□ 1.3
FAM228B-208ENST00000613899 WASF2Q9Y6W5 498 aa23.18■■□□□ 1.3
FAM228B-208ENST00000613899 TEX33O43247 280 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 DKK1O94907 266 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 ITGAVP06756 1048 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 ATXN1LP0C7T5 689 aaKnown RBP23.17■■□□□ 1.3
FAM228B-208ENST00000613899 EPHA8P29322 1005 aaPredicted RBP23.17■■□□□ 1.3
FAM228B-208ENST00000613899 ACVRL1P37023 503 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 DNA2P51530 1060 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms