RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SIGLEC14Q08ET2 396 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 SLC10A7Q0GE19 358 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 LRRC32Q14392 662 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 ZNF235Q14590 738 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 PTPRNQ16849 979 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 FNDC3BQ53EP0 1204 aaKnown RBP14.97□□□□□ -0.01
CD48-203ENST00000613788 TEX44Q53QW1 395 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 SDE2Q6IQ49 451 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 GSTA5Q7RTV2 222 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 TRMT11Q7Z4G4 463 aaKnown RBP14.97□□□□□ -0.01
CD48-203ENST00000613788 TEX26Q8N6G2 289 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 ZNF513Q8N8E2 541 aaPredicted RBP14.97□□□□□ -0.01
CD48-203ENST00000613788 EZH1Q92800 747 aaPredicted RBP14.97□□□□□ -0.01
CD48-203ENST00000613788 ISG20Q96AZ6 181 aaKnown RBP14.97□□□□□ -0.01
CD48-203ENST00000613788 MRGPRX3Q96LB0 322 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 CCDC114Q96M63 670 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 IL12RB2Q99665 862 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 CINPQ9BW66 212 aaPredicted RBP14.97□□□□□ -0.01
CD48-203ENST00000613788 CEP44Q9C0F1 390 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 C10orf88Q9H8K7 445 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 RBM12Q9NTZ6 932 aaKnown RBP14.97□□□□□ -0.01
CD48-203ENST00000613788 SLCO3A1Q9UIG8 710 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 TRHDEQ9UKU6 1024 aa14.97□□□□□ -0.01
CD48-203ENST00000613788 KIAA1549LQ6ZVL6 1849 aa14.96□□□□□ -0.01
CD48-203ENST00000613788 CTAGE15A4D2H0 777 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 TMCC1O94876 653 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 CTAGE8P0CG41 777 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 ALADP13716 330 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 TIE1P35590 1138 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 ACTN2P35609 894 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 HSPA9P38646 679 aaKnown RBP14.96□□□□□ -0.02
CD48-203ENST00000613788 KIR2DL1P43626 348 aaPredicted RBP14.96□□□□□ -0.02
CD48-203ENST00000613788 SEC13P55735 322 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 CCINQ13939 588 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 ZNF234Q14588 700 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 UBXN2BQ14CS0 331 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 CYTH1Q15438 398 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 DLG2Q15700 870 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 HSF5Q4G112 596 aaPredicted RBP14.96□□□□□ -0.02
CD48-203ENST00000613788 EMC10Q5UCC4 262 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 SERPINA13PQ6UXR4 307 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 CTAGE6Q86UF2 777 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 CTAGE4Q8IX94 777 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 KLHL7Q8IXQ5 586 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 SYNPOQ8N3V7 929 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 CCDC89Q8N998 374 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 FAM71DQ8N9W8 422 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 PSKH2Q96QS6 385 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 DDX47Q9H0S4 455 aaKnown RBP14.96□□□□□ -0.02
CD48-203ENST00000613788 L2HGDHQ9H9P8 463 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 LTB4R2Q9NPC1 389 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 SUN2Q9UH99 717 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 PCYOX1Q9UHG3 505 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 ACTL7AQ9Y615 435 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 CHD5Q8TDI0 1954 aa14.96□□□□□ -0.02
CD48-203ENST00000613788 C5orf60A6NFR6 353 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 FAM170BA6NMN3 283 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 K7ERQ8 282 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 RNF103O00237 685 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 SMAD6O43541 496 aaKnown RBP14.95□□□□□ -0.02
CD48-203ENST00000613788 IFNB1P01574 187 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 PTPN3P26045 913 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 RHOAP61586 193 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 NSUN2Q08J23 767 aaKnown RBP eCLIP14.95□□□□□ -0.02
CD48-203ENST00000613788 WASHC5Q12768 1159 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 C2orf27AQ580R0 203 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 EGFLAMQ63HQ2 1017 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 TTC27Q6P3X3 843 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 PID1Q7Z2X4 250 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 PLPP6Q8IY26 295 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 CHPFQ8IZ52 775 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 ALLCQ8N6M5 410 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 PCDH20Q8N6Y1 951 aaKnown RBP14.95□□□□□ -0.02
CD48-203ENST00000613788 USP33Q8TEY7 942 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 RTP4Q96DX8 246 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 MYO19Q96H55 970 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 TEKT5Q96M29 485 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 OSBPL6Q9BZF3 934 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 TBC1D17Q9HA65 648 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 LMAN1LQ9HAT1 526 aa14.95□□□□□ -0.02
CD48-203ENST00000613788 KLHL8Q9P2G9 620 aaPredicted RBP14.95□□□□□ -0.02
CD48-203ENST00000613788 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
CD48-203ENST00000613788 OPHN1O60890 802 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 GCATO75600 419 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 GAS8O95995 478 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 CHRNB1P11230 501 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 CES1P23141 567 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 TARSP26639 723 aaKnown RBP14.94□□□□□ -0.02
CD48-203ENST00000613788 NTSR1P30989 418 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 RECQLP46063 649 aaPredicted RBP14.94□□□□□ -0.02
CD48-203ENST00000613788 SNRPD1P62314 119 aaKnown RBP14.94□□□□□ -0.02
CD48-203ENST00000613788 C2orf54Q08AI8 447 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 ZBTB17Q13105 803 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 P3H1Q32P28 736 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 ANKRD20A2Q5SQ80 823 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 ANKRD20A1Q5TYW2 823 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 ANKRD20A3Q5VUR7 823 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 C22orf39Q6P5X5 142 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 C4orf22Q6V702 233 aa14.94□□□□□ -0.02
CD48-203ENST00000613788 ZNF687Q8N1G0 1237 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms