RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 BECN2A8MW95 431 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 ZNF821O75541 412 aaPredicted RBP23.98■■□□□ 1.43
MMP28-203ENST00000612672 TFE3P19532 575 aaPredicted RBP23.98■■□□□ 1.43
MMP28-203ENST00000612672 BMP6P22004 513 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 GNA15P30679 374 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 OXCT1P55809 520 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 CDK17Q00537 523 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 APBA1Q02410 837 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 KIAA1614Q5VZ46 1190 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 NEK5Q6P3R8 708 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 GUSBP11Q6P575 273 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 CRTC1Q6UUV9 634 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 FAM183BPQ6ZVS7 135 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 TRIM59Q8IWR1 403 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 MAPK15Q8TD08 544 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 RNF34Q969K3 372 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 ATXN7L3BQ96GX2 97 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 MUC3BQ9H195 1237 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 UBR5O95071 2799 aaPredicted RBP23.98■■□□□ 1.43
MMP28-203ENST00000612672 PTPN13Q12923 2485 aa23.98■■□□□ 1.43
MMP28-203ENST00000612672 A0A0D9SEW6 157 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 CLDN11O75508 207 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 UCNP55089 124 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 NME3Q13232 169 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 CDKN3Q16667 212 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 HS1BP3Q53T59 392 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 ARSIQ5FYB1 569 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 ERN2Q76MJ5 926 aaKnown RBP23.97■■□□□ 1.43
MMP28-203ENST00000612672 PASD1Q8IV76 773 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 LSMEM2Q8N112 164 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 ATP11CQ8NB49 1132 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 TMIEQ8NEW7 156 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 SMARCE1Q969G3 411 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 GTPBP4Q9BZE4 634 aaKnown RBP23.97■■□□□ 1.43
MMP28-203ENST00000612672 UBE2TQ9NPD8 197 aaPredicted RBP23.97■■□□□ 1.43
MMP28-203ENST00000612672 TMPRSS4Q9NRS4 437 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 ENTPD2Q9Y5L3 495 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 WASF2Q9Y6W5 498 aa23.97■■□□□ 1.43
MMP28-203ENST00000612672 A6NNZ2 444 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 SPINT1O43278 529 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 PCDH8O95206 1070 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 ADCY5O95622 1261 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 ALPPL2P10696 532 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 SLC2A3P11169 496 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 CDH4P55283 916 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 VAC14Q08AM6 782 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 C22orf39Q6P5X5 142 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 OLFML1Q6UWY5 402 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 IFT43Q96FT9 208 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 HDAC8Q9BY41 377 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 SIK2Q9H0K1 926 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 PIGVQ9NUD9 493 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 MAN1B1Q9UKM7 699 aa23.96■■□□□ 1.43
MMP28-203ENST00000612672 PNMA8BQ9ULN7 279 aaPredicted RBP23.96■■□□□ 1.43
MMP28-203ENST00000612672 PSMA7O14818 248 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 ENDOD1O94919 500 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 ERBB2P04626 1255 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 PDX1P52945 283 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 PERM1Q5SV97 790 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 KLHL10Q6JEL2 608 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 IGF2-ASQ6U949 168 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 KYAT3Q6YP21 454 aaKnown RBP23.95■■□□□ 1.42
MMP28-203ENST00000612672 DPY19L3Q6ZPD9 716 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 DHTKD1Q96HY7 919 aaPredicted RBP23.95■■□□□ 1.42
MMP28-203ENST00000612672 DPH1Q9BZG8 443 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 THSD1Q9NS62 852 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 ASNSD1Q9NWL6 643 aa23.95■■□□□ 1.42
MMP28-203ENST00000612672 PPP1R3GB7ZBB8 358 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 B8ZZF3 427 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 MED7O43513 233 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 HSF2BPO75031 334 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 LEFTY1O75610 366 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 CSF2P04141 144 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 RHOCP08134 193 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 GLI1P08151 1106 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 C6P13671 934 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 NME1P15531 152 aaKnown RBP23.94■■□□□ 1.42
MMP28-203ENST00000612672 CETN1Q12798 172 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 MAPK8IP2Q13387 824 aaPredicted RBP23.94■■□□□ 1.42
MMP28-203ENST00000612672 DEFB133Q30KQ1 61 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 EFL1Q7Z2Z2 1120 aaKnown RBP23.94■■□□□ 1.42
MMP28-203ENST00000612672 OR7D4Q8NG98 312 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 PPP1R13BQ96KQ4 1090 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 SLC46A1Q96NT5 459 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 KLF6Q99612 283 aaPredicted RBP23.94■■□□□ 1.42
MMP28-203ENST00000612672 ABCG4Q9H172 646 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 TCEAL2Q9H3H9 227 aaPredicted RBP23.94■■□□□ 1.42
MMP28-203ENST00000612672 IL36AQ9UHA7 158 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 ACTL7AQ9Y615 435 aa23.94■■□□□ 1.42
MMP28-203ENST00000612672 CHD5Q8TDI0 1954 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 SPTY2D1-AS1A0A0U1RR47 76 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 CPED1A4D0V7 1026 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 CAPN8A6NHC0 703 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 DAB1O75553 588 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 SMC2O95347 1197 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 PAK4O96013 591 aaPredicted RBP23.93■■□□□ 1.42
MMP28-203ENST00000612672 PRNPP04156 253 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 HNRNPKP61978 463 aaKnown RBP eCLIP23.93■■□□□ 1.42
MMP28-203ENST00000612672 TFAP2DQ7Z6R9 452 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 RBFAQ8N0V3 343 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms