RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RRN3Q9NYV6 651 aa14.96□□□□□ -0.01
CDH1-213ENST00000612417 TRHDEQ9UKU6 1024 aa14.96□□□□□ -0.01
CDH1-213ENST00000612417 PCDHB12Q9Y5F1 795 aa14.96□□□□□ -0.01
CDH1-213ENST00000612417 A0A088AWK7 358 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 TBKBP1A7MCY6 615 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 I6L893 689 aaPredicted RBP14.96□□□□□ -0.02
CDH1-213ENST00000612417 CPA3P15088 417 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 BIRC2Q13490 618 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 MAPRE1Q15691 268 aaKnown RBP14.96□□□□□ -0.02
CDH1-213ENST00000612417 RAB41Q5JT25 222 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 CES3Q6UWW8 571 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 LRRTM3Q86VH5 581 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 ZNF669Q96BR6 464 aaPredicted RBP14.96□□□□□ -0.02
CDH1-213ENST00000612417 TOX2Q96NM4 488 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 VAT1Q99536 393 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 MCMBPQ9BTE3 642 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 ULBP1Q9BZM6 244 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 ANLNQ9NQW6 1124 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 TMEM39AQ9NV64 488 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 IL1RAPL1Q9NZN1 696 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 WASF2Q9Y6W5 498 aa14.96□□□□□ -0.02
CDH1-213ENST00000612417 TANC1Q9C0D5 1861 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 MAGEB16A2A368 324 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 YJEFN3A6XGL0 299 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 MAP3K7O43318 606 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 HOXA2O43364 376 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 UPP2O95045 317 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 PARNO95453 639 aaKnown RBP14.95□□□□□ -0.02
CDH1-213ENST00000612417 ALDH2P05091 517 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 MPOP05164 745 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 USP17L7P0C7H9 530 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 CSE1LP55060 971 aaKnown RBP14.95□□□□□ -0.02
CDH1-213ENST00000612417 AP2B1P63010 937 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 IRX1P78414 480 aaPredicted RBP14.95□□□□□ -0.02
CDH1-213ENST00000612417 GALNT2Q10471 571 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 TMCO4Q5TGY1 634 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 FSTL4Q6MZW2 842 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 STRA8Q7Z7C7 330 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 NPAS4Q8IUM7 802 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 SPATA2LQ8IUW3 424 aaPredicted RBP14.95□□□□□ -0.02
CDH1-213ENST00000612417 NPWQ8N729 165 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 ZMIZ2Q8NF64 920 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 CLPTM1LQ96KA5 538 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 ZNF184Q99676 751 aaPredicted RBP14.95□□□□□ -0.02
CDH1-213ENST00000612417 TMEM30AQ9NV96 361 aa14.95□□□□□ -0.02
CDH1-213ENST00000612417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 TMEM189-UBE2V1I3L0A0 370 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 FKBP6O75344 327 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 ANPEPP15144 967 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 CD68P34810 354 aaPredicted RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 COPAP53621 1224 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 MXRA7P84157 204 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 BTKQ06187 659 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 OLIG2Q13516 323 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 C1orf146Q5VVC0 180 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 ITPRIPL1Q6GPH6 555 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 AAGABQ6PD74 315 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 FBXO46Q6PJ61 603 aaPredicted RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 GPRIN1Q7Z2K8 1008 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 CMC1Q7Z7K0 106 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 ADGRG6Q86SQ4 1221 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 KLHDC8BQ8IXV7 354 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 DPF3Q92784 378 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 COLEC11Q9BWP8 271 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 PNPOQ9NVS9 261 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 CDY1Q9Y6F8 540 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 TMEM114B3SHH9 223 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 ZBTB24O43167 697 aaPredicted RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 TIMM44O43615 452 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 CCNT2O60583 730 aaKnown RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 H2AFYO75367 372 aaKnown RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 F9P00740 461 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 CXCL10P02778 98 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 PDHA1P08559 390 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 OR4Q2P0C623 313 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 PRDX6P30041 224 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 NPY2RP49146 381 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 CSRP3P50461 194 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 ITGA9Q13797 1035 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 ARL13BQ3SXY8 428 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 SLC39A12Q504Y0 691 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 FAM171A1Q5VUB5 890 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 AGAP3Q96P47 875 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 MLPHQ9BV36 600 aaPredicted RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 IL22Q9GZX6 179 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 DMAP1Q9NPF5 467 aaPredicted RBP14.94□□□□□ -0.02
CDH1-213ENST00000612417 HCSTQ9UBK5 93 aa14.94□□□□□ -0.02
CDH1-213ENST00000612417 MICAL3Q7RTP6 2002 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 MKI67P46013 3256 aaKnown RBP14.93□□□□□ -0.02
CDH1-213ENST00000612417 G3V2L1 256 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 AP3B1O00203 1094 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 USP12O75317 370 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 LTFP02788 710 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 AMHP03971 560 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 LINGO3P0C6S8 592 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 DNAJB2P25686 324 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 SERPINB6P35237 376 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 HADHAP40939 763 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 PDPK2PQ6A1A2 396 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms