RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ALS2Q96Q42 1657 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 CROCCQ5TZA2 2017 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 DUOX1Q9NRD9 1551 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 DCCP43146 1447 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 A0A0B4J269 797 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 A0A0G2JND7 137 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 NPHP3-ACAD11A0A0J9YXS1 232 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 PRSS51A0A1B0GVH4 220 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 A0A1W2PPM1 405 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM172BPA6NC97 362 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCDC160A6NGH7 325 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 E7ESA3 106 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 GOLGA8MH3BSY2 632 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 K7EPI3 171 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ATP2A1O14983 1001 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADAMTS3O15072 1205 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC22A2O15244 555 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SHOXO15266 292 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SCO2O43819 266 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 AKAP8O43823 692 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SNNO75324 88 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 BBOX1O75936 387 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 FKBP9O95302 570 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZBTB7AO95365 584 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 FTLP02792 175 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCDC159P0C7I6 412 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 MYL2P10916 166 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ACTN1P12814 892 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 MYL6BP14649 208 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCNA2P16389 499 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF26P17031 533 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 PROZP22891 400 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 PEX2P28328 305 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 NMT1P30419 496 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 S100A5P33763 92 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 RFC1P35251 1148 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 COPB2P35606 906 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TECP42680 631 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KCNJ1P48048 391 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 PSMD8P48556 350 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 BMXP51813 675 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 CASP5P51878 434 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 THOP1P52888 689 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMBIM6P55061 237 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TAGLNQ01995 201 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 RIPPLY1Q0D2K3 151 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 CDC20Q12834 499 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 EIF2B5Q13144 721 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KLF1Q13351 362 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SMAD4Q13485 552 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRPC3Q13507 836 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TUBB3Q13509 450 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TUBA3CQ13748 450 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 DRAP1Q14919 205 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMED2Q15363 201 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRIP10Q15642 601 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRIP13Q15645 432 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SEPT7Q16181 437 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KNOP1Q1ED39 458 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ABCB5Q2M3G0 1257 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KLHL38Q2WGJ6 581 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 RABGAP1LQ5R372 815 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 C6orf10Q5SRN2 563 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT79Q5XKE5 535 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 EGFLAMQ63HQ2 1017 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 EEF1DP3Q658K8 133 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAAH2Q6GMR7 532 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 GLB1LQ6UWU2 654 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARCQ7LC44 396 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KRT28Q7Z3Y7 464 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 GPR141Q7Z602 305 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADAT2Q7Z6V5 191 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TTC30AQ86WT1 665 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 HEATR4Q86WZ0 1026 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 CARM1Q86X55 608 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 MCF2L2Q86YR7 1114 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 LACC1Q8IV20 430 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC7A5P1Q8MH63 180 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ELMOD1Q8N336 334 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TTC30BQ8N4P2 665 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZBTB38Q8NAP3 1195 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 NETO2Q8NC67 525 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 GSTCDQ8NEC7 633 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 LILRB4Q8NHJ6 448 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 TCP10LQ8TDR4 215 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC26A7Q8TE54 656 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 AFG1LQ8WV93 481 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 KBTBD7Q8WVZ9 684 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 RAPGEF4Q8WZA2 1011 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 DPF3Q92784 378 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 RPGRQ92834 1020 aaKnown RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC35C1Q96A29 364 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ISOC1Q96CN7 298 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 VMP1Q96GC9 406 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 EGLN2Q96KS0 407 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 GCNAQ96QF7 691 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 UIMC1Q96RL1 719 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZNF347Q96SE7 839 aa4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 UHRF1Q96T88 793 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P50-201ENST00000605814 RMDN3Q96TC7 470 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms