RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LIN37Q96GY3 246 aaPredicted RBP12.06□□□□□ -0.48
PDLIM1P1-201ENST00000604187 BMFQ96LC9 184 aa12.06□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SEMA3CQ99985 751 aa12.06□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CCDC3Q9BQI4 270 aa12.06□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ZSWIM1Q9BR11 485 aa12.06□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PCDHA7Q9UN72 937 aa12.06□□□□□ -0.48
PDLIM1P1-201ENST00000604187 NBASA2RRP1 2371 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TEP1Q99973 2627 aaKnown RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 RNF103O00237 685 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TPP1O14773 563 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SART1O43290 800 aaKnown RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CALCAP01258 141 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PAEPP09466 180 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 HGFP14210 728 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 RABIFP47224 123 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CYP4F2P78329 520 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FGL2Q14314 439 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 DCAF17Q5H9S7 520 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FOXD4L5Q5VV16 416 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ERN2Q76MJ5 926 aaKnown RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 RAB11FIP2Q7L804 512 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 RBFAQ8N0V3 343 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FBXO39Q8N4B4 442 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 OR2A12Q8NGT7 310 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FOXD4L4Q8WXT5 416 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 GLMNQ92990 594 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 HSFY1Q96LI6 401 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CCDC114Q96M63 670 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 RPRD1AQ96P16 312 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PRMT1Q99873 361 aaKnown RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FEM1AQ9BSK4 669 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 BOCQ9BWV1 1114 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 HDAC8Q9BY41 377 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ACSL6Q9UKU0 697 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 HS3ST3A1Q9Y663 406 aa12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TP53BP1Q12888 1972 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1P1-201ENST00000604187 NBPF19A0A087WUL8 3843 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 KCNU1A8MYU2 1149 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 K7ERQ8 282 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SPINT1O43278 529 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 GCATO75600 419 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TRUB2O95900 331 aaKnown RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PAK4O96013 591 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 MT-CO1P00395 513 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PRNPP04156 253 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 LIPCP11150 499 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SRCP12931 536 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CR2P20023 1033 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 IRAK1P51617 712 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 RPS21P63220 83 aaKnown RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PITX1P78337 314 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 EIF3IQ13347 325 aaKnown RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 C1orf61Q13536 156 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CLCA4Q14CN2 919 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CNGA2Q16280 664 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ZCWPW2Q504Y3 356 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 MANEAQ5SRI9 462 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TCERG1LQ5VWI1 586 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FBXL22Q6P050 247 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ATP6V0D2Q8N8Y2 350 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ATP11CQ8NB49 1132 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 CHST14Q8NCH0 376 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TMIEQ8NEW7 156 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PPP1R13BQ96KQ4 1090 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PPP1R9BQ96SB3 815 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SLC17A9Q9BYT1 436 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FOXP3Q9BZS1 431 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 STRADBQ9C0K7 418 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SLC25A18Q9H1K4 315 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 EPN3Q9H201 632 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TCEAL2Q9H3H9 227 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FAM204AQ9H8W3 233 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ST7Q9NRC1 585 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SPASTQ9UBP0 616 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PISDQ9UG56 409 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 APOBEC3BQ9UH17 382 aaKnown RBP12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PADI4Q9UM07 663 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 HS3ST2Q9Y278 367 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 OR51B4Q9Y5P0 310 aa12.04□□□□□ -0.48
PDLIM1P1-201ENST00000604187 MYH10P35580 1976 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 SYNJ2BP-COX16A0A087WUM0 186 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 D6RAR5 112 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 NTN3O00634 580 aaPredicted RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 FPGTO14772 594 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 IGLV3-25P01717 112 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 WT1P19544 449 aaPredicted RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 RRM1P23921 792 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 GGCXP38435 758 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 NEK3P51956 506 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 ADKP55263 362 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 EIF2B5Q13144 721 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PRRT3Q5FWE3 981 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 KIAA1161Q6NSJ0 714 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 BEND5Q7L4P6 421 aa12.03□□□□□ -0.48
PDLIM1P1-201ENST00000604187 PTRH1Q86Y79 214 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms