RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PGBD3Q8N328 593 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 PLD5Q8N7P1 536 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 TRIM58Q8NG06 486 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 OR2A12Q8NGT7 310 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 PRCCQ92733 491 aaPredicted RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 FATE1Q969F0 183 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 SIPA1Q96FS4 1042 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 HES6Q96HZ4 224 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 TSGA13Q96PP4 275 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 SEMA4AQ9H3S1 761 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 MTG2Q9H4K7 406 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 ITM2CQ9NQX7 267 aa14.14□□□□□ -0.15
RNF40-212ENST00000602784 UBA2Q9UBT2 640 aaPredicted RBP14.14□□□□□ -0.15
RNF40-212ENST00000602784 J3KR12 359 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 APOL1O14791 398 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 MFSD11O43934 449 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 MAFKO60675 156 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 FTCDO95954 541 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 GSRP00390 522 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 IGLV3-19P01714 112 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 MX2P20592 715 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 CETN2P41208 172 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 GARSP41250 739 aaKnown RBP14.13□□□□□ -0.15
RNF40-212ENST00000602784 RECQLP46063 649 aaPredicted RBP14.13□□□□□ -0.15
RNF40-212ENST00000602784 NR2C2P49116 596 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 RPS14P62263 151 aaKnown RBP14.13□□□□□ -0.15
RNF40-212ENST00000602784 SFSWAPQ12872 951 aaKnown RBP14.13□□□□□ -0.15
RNF40-212ENST00000602784 CARD16Q5EG05 197 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 Q6ZVU0 165 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 C11orf74Q86VG3 221 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 REXO1L1PQ8IX06 675 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 TP53INP2Q8IXH6 220 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 STK40Q8N2I9 435 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 ATPAF2Q8N5M1 289 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 OR8D1Q8WZ84 308 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 ALG3Q92685 438 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 ATOH1Q92858 354 aaPredicted RBP14.13□□□□□ -0.15
RNF40-212ENST00000602784 ALS2CR12Q96Q35 445 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 SP110Q9HB58 689 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 DTLQ9NZJ0 730 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 USP36Q9P275 1121 aaKnown RBP14.13□□□□□ -0.15
RNF40-212ENST00000602784 PPM1HQ9ULR3 514 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 FANCMQ8IYD8 2048 aa14.13□□□□□ -0.15
RNF40-212ENST00000602784 hCG_1818297A0A087WSY0 165 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 HRO43593 1189 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 RPP40O75818 363 aaKnown RBP14.12□□□□□ -0.15
RNF40-212ENST00000602784 TMCC1O94876 653 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 PEX11BO96011 259 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 ADH1BP00325 375 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 ACADMP11310 421 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 CCNCP24863 283 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 P2RY2P41231 377 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 NBL1P41271 181 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 SNRPD1P62314 119 aaKnown RBP14.12□□□□□ -0.15
RNF40-212ENST00000602784 GBE1Q04446 702 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 ZNF33AQ06730 810 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 NSUN2Q08J23 767 aaKnown RBP eCLIP14.12□□□□□ -0.15
RNF40-212ENST00000602784 SLC10A2Q12908 348 aaPredicted RBP14.12□□□□□ -0.15
RNF40-212ENST00000602784 CYTH1Q15438 398 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 CST6Q15828 149 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 MAP7D1Q3KQU3 841 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 FAM46CQ5VWP2 391 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 ARHGAP36Q6ZRI8 547 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 BZW1Q7L1Q6 419 aaKnown RBP14.12□□□□□ -0.15
RNF40-212ENST00000602784 RFX6Q8HWS3 928 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 CCDC50Q8IVM0 306 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 TMIEQ8NEW7 156 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 OR2AP1Q8NGE2 309 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 LRIG1Q96JA1 1093 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 TPSD1Q9BZJ3 242 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 BRD8Q9H0E9 1235 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 FCF1Q9Y324 198 aaKnown RBP14.12□□□□□ -0.15
RNF40-212ENST00000602784 ACTL7AQ9Y615 435 aa14.12□□□□□ -0.15
RNF40-212ENST00000602784 NYNRINQ9P2P1 1898 aaKnown RBP14.12□□□□□ -0.15
RNF40-212ENST00000602784 DDX3YO15523 660 aaKnown RBP14.11□□□□□ -0.15
RNF40-212ENST00000602784 CST8O60676 142 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 POP4O95707 220 aaKnown RBP14.11□□□□□ -0.15
RNF40-212ENST00000602784 DNTTP04053 509 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 PRNPP04156 253 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 PYGMP11217 842 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 KRT10P13645 584 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 C5AR1P21730 350 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 TGM2P21980 687 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 OXTRP30559 389 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 CHRNA3P32297 505 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 CSNK1DP48730 415 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 TPMTP51580 245 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 HNRNPDQ14103 355 aaKnown RBP14.11□□□□□ -0.15
RNF40-212ENST00000602784 PDK1Q15118 436 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 TTC31Q49AM3 519 aaPredicted RBP14.11□□□□□ -0.15
RNF40-212ENST00000602784 MEI1Q5TIA1 1274 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 TIGD7Q6NT04 549 aaPredicted RBP14.11□□□□□ -0.15
RNF40-212ENST00000602784 KIAA1324Q6UXG2 1013 aaKnown RBP14.11□□□□□ -0.15
RNF40-212ENST00000602784 LEKR1Q6ZMV7 388 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 DPY19L3Q6ZPD9 716 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 BBS12Q6ZW61 710 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 USP30Q70CQ3 517 aa14.11□□□□□ -0.15
RNF40-212ENST00000602784 MMAAQ8IVH4 418 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms