RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 NETO2Q8NC67 525 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 PIP4K2CQ8TBX8 421 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
RPS28-203ENST00000600659 OR8D1Q8WZ84 308 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 CEP44Q9C0F1 390 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 BTBD1Q9H0C5 482 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 NEUROG2Q9H2A3 272 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 TNKS2Q9H2K2 1166 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 ZWILCHQ9H900 591 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 PDFQ9HBH1 243 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 ETNK2Q9NVF9 386 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 DLL3Q9NYJ7 618 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 CTTNBP2NLQ9P2B4 639 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 EVLQ9UI08 416 aaPredicted RBP16.07■□□□□ 0.16
RPS28-203ENST00000600659 WASF2Q9Y6W5 498 aa16.07■□□□□ 0.16
RPS28-203ENST00000600659 MYO1FO00160 1098 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 RNASEH1O60930 286 aaKnown RBP16.06■□□□□ 0.16
RPS28-203ENST00000600659 MTA2O94776 668 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 SEMA4FO95754 770 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 IL1BP01584 269 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 IGHV4-34P06331 123 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 IL4RP24394 825 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 MAOBP27338 520 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 HOXD12P35452 270 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 TAS2R40P59535 323 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 SERINC3Q13530 473 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 TSR1Q2NL82 804 aaKnown RBP16.06■□□□□ 0.16
RPS28-203ENST00000600659 PARP15Q460N3 678 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 ATP13A4Q4VNC1 1196 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 BOLA3Q53S33 107 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 PPP6R3Q5H9R7 873 aaPredicted RBP16.06■□□□□ 0.16
RPS28-203ENST00000600659 AGBL4Q5VU57 503 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 PCDH20Q8N6Y1 951 aaKnown RBP16.06■□□□□ 0.16
RPS28-203ENST00000600659 FOXJ1Q92949 421 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 ARRDC3Q96B67 414 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 CELF6Q96J87 481 aaKnown RBP16.06■□□□□ 0.16
RPS28-203ENST00000600659 PCED1AQ9H1Q7 454 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 SGK2Q9HBY8 427 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 CAPN10Q9HC96 672 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 PCDH18Q9HCL0 1135 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.06■□□□□ 0.16
RPS28-203ENST00000600659 FZD4Q9ULV1 537 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.06■□□□□ 0.16
RPS28-203ENST00000600659 CACNA1AO00555 2505 aa16.06■□□□□ 0.16
RPS28-203ENST00000600659 CNOT1A5YKK6 2376 aaKnown RBP16.06■□□□□ 0.16
RPS28-203ENST00000600659 BNIP3LO60238 219 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 CD48P09326 243 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 CHRNA3P32297 505 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 MAN1A1P33908 653 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 ZNF135P52742 658 aaPredicted RBP16.05■□□□□ 0.16
RPS28-203ENST00000600659 ADPRHP54922 357 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 IRX4P78413 519 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 TCEAL1Q15170 157 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 TRIM61Q5EBN2 209 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 SLC23A3Q6PIS1 610 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 HDDC3Q8N4P3 179 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 SLC35G2Q8TBE7 412 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 RFFLQ8WZ73 363 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 HSPH1Q92598 858 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 ISG20Q96AZ6 181 aaKnown RBP16.05■□□□□ 0.16
RPS28-203ENST00000600659 CSPG4P5Q96PW8 444 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 SLC39A8Q9C0K1 460 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 EBF2Q9HAK2 575 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 FSCN3Q9NQT6 498 aa16.05■□□□□ 0.16
RPS28-203ENST00000600659 CDX4O14627 284 aaPredicted RBP16.04■□□□□ 0.16
RPS28-203ENST00000600659 RNASEH2AO75792 299 aaKnown RBP16.04■□□□□ 0.16
RPS28-203ENST00000600659 TMCC1O94876 653 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 AMPD1P23109 780 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 CCNHP51946 323 aaPredicted RBP16.04■□□□□ 0.16
RPS28-203ENST00000600659 NDST2P52849 883 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 LIMK1P53667 647 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 TAS2R38P59533 333 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 CNTN1Q12860 1018 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 RSPO4Q2I0M5 234 aaPredicted RBP16.04■□□□□ 0.16
RPS28-203ENST00000600659 POM121L1PQ3SYA9 428 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 PIP5KL1Q5T9C9 394 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 NCEH1Q6PIU2 408 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 ARHGAP36Q6ZRI8 547 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 TMEM139Q8IV31 216 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 PLPP6Q8IY26 295 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 TMIEQ8NEW7 156 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 BIRC7Q96CA5 298 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 TM6SF2Q9BZW4 377 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 INTUQ9ULD6 942 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 TFR2Q9UP52 801 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 TRPM6Q9BX84 2022 aa16.04■□□□□ 0.16
RPS28-203ENST00000600659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.03■□□□□ 0.16
RPS28-203ENST00000600659 ZSCAN5CA6NGD5 496 aaPredicted RBP16.03■□□□□ 0.16
RPS28-203ENST00000600659 PRR5-ARHGAP8B1AHC4 643 aa16.03■□□□□ 0.16
RPS28-203ENST00000600659 J3KR12 359 aa16.03■□□□□ 0.16
RPS28-203ENST00000600659 FOXD2O60548 495 aaPredicted RBP16.03■□□□□ 0.16
RPS28-203ENST00000600659 PRAMEF11O60813 436 aa16.03■□□□□ 0.16
RPS28-203ENST00000600659 LEFTY1O75610 366 aa16.03■□□□□ 0.16
RPS28-203ENST00000600659 GKP32189 559 aa16.03■□□□□ 0.16
RPS28-203ENST00000600659 DPP6P42658 865 aa16.03■□□□□ 0.16
RPS28-203ENST00000600659 PPP2CBP62714 309 aa16.03■□□□□ 0.16
RPS28-203ENST00000600659 PPP2CAP67775 309 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms