RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 DYRK4Q9NR20 520 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 TOR4AQ9NXH8 423 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 IL36AQ9UHA7 158 aa16.15■□□□□ 0.18
VRK3-221ENST00000600284 USP24Q9UPU5 2620 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 PRAMEF26H0Y7S4 382 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 KPNA3O00505 521 aaPredicted RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 ZNF821O75541 412 aaPredicted RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 ATXN1LP0C7T5 689 aaKnown RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 RFC1P35251 1148 aaPredicted RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 RXRGP48443 463 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 SERPINH1P50454 418 aaKnown RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 HDAC4P56524 1084 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 GEMIN4P57678 1058 aaKnown RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 TAS2R38P59533 333 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 TYRO3Q06418 890 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 STAT4Q14765 748 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 POM121L1PQ3SYA9 428 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 WDR59Q6PJI9 974 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 LINGO4Q6UY18 593 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 CCNI2Q6ZMN8 369 aaPredicted RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 DPY19L3Q6ZPD9 716 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 PHLDB2Q86SQ0 1253 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 NLRP14Q86W24 1093 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 SAP25Q8TEE9 199 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 ISG20Q96AZ6 181 aaKnown RBP16.14■□□□□ 0.17
VRK3-221ENST00000600284 BPIFA3Q9BQP9 254 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 MAGEH1Q9H213 219 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 TMEM248Q9NWD8 314 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 MYO6Q9UM54 1294 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 PLXNA2O75051 1894 aa16.14■□□□□ 0.17
VRK3-221ENST00000600284 DOCK4Q8N1I0 1966 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 ANKRD62A6NC57 917 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 ITGAVP06756 1048 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 PLEKP08567 350 aaPredicted RBP16.13■□□□□ 0.17
VRK3-221ENST00000600284 FERP16591 822 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 GPD1P21695 349 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 GLDCP23378 1020 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 ARF5P84085 180 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 SCAPQ12770 1279 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 SHBQ15464 509 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 RAB6CQ53S08 254 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 CARD16Q5EG05 197 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 ARSIQ5FYB1 569 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 RWDD4Q6NW29 188 aaKnown RBP16.13■□□□□ 0.17
VRK3-221ENST00000600284 PPP1R2P3Q6NXS1 205 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 ERN2Q76MJ5 926 aaKnown RBP16.13■□□□□ 0.17
VRK3-221ENST00000600284 MON1BQ7L1V2 547 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 TMPRSS7Q7RTY8 843 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 DRC7Q8IY82 874 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 CHST14Q8NCH0 376 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 FAM172AQ8WUF8 416 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 ARRDC3Q96B67 414 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 TBC1D31Q96DN5 1066 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 HEPHQ9BQS7 1158 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 RAB6CQ9H0N0 254 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 FRYQ5TBA9 3013 aa16.13■□□□□ 0.17
VRK3-221ENST00000600284 TMEM131Q92545 1883 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 TCRBV5S1A1TA0A578 114 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 SMTNL1A8MU46 457 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 LEFTY1O75610 366 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 LRIG2O94898 1065 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 CDK4P11802 303 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 MAT2AP31153 395 aaKnown RBP16.12■□□□□ 0.17
VRK3-221ENST00000600284 ZNF143P52747 638 aaPredicted RBP16.12■□□□□ 0.17
VRK3-221ENST00000600284 AIF1P55008 147 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 IL9RQ01113 521 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 PRAMEF14Q5SWL7 426 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 SLFN11Q7Z7L1 901 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 ZSCAN30Q86W11 494 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 HORMAD1Q86X24 394 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 GALNT15Q8N3T1 639 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 AOPEPQ8N6M6 819 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 FAM174AQ8TBP5 190 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 ZCCHC14Q8WYQ9 949 aaKnown RBP16.12■□□□□ 0.17
VRK3-221ENST00000600284 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
VRK3-221ENST00000600284 LRIG1Q96JA1 1093 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 VCPIP1Q96JH7 1222 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 TNKS2Q9H2K2 1166 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 SEPT11Q9NVA2 429 aaKnown RBP16.12■□□□□ 0.17
VRK3-221ENST00000600284 FTSJ1Q9UET6 329 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 HPCAL4Q9UM19 191 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 WASF2Q9Y6W5 498 aa16.12■□□□□ 0.17
VRK3-221ENST00000600284 A0A1W2PQU0 124 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 FAM72CH0Y354 149 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 GJB6O95452 261 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 CD160O95971 181 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 CAPNS1P04632 268 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 ATP1A3P13637 1013 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 DESP17661 470 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 ITGB7P26010 798 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 EPHA8P29322 1005 aaPredicted RBP16.11■□□□□ 0.17
VRK3-221ENST00000600284 L1CAMP32004 1257 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 NEK3P51956 506 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 FAM72AQ5TYM5 149 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 ACAD10Q6JQN1 1059 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 FAM72DQ6L9T8 149 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 DNAJC24Q6P3W2 148 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 IRF2BP2Q7Z5L9 587 aa16.11■□□□□ 0.17
VRK3-221ENST00000600284 FAM72BQ86X60 149 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms