RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FGL2Q14314 439 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 TICAM1Q8IUC6 712 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 SLC4A11Q8NBS3 891 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 C9orf43Q8TAL5 461 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-207ENST00000600244 TMC2Q8TDI7 906 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 USP7Q93009 1102 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 PPP1R13BQ96KQ4 1090 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 TMEM74Q96NL1 305 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 NIF3L1Q9GZT8 377 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 LRRC4Q9HBW1 653 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 LMO7DNF2Z398 122 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 XPO1O14980 1071 aaKnown RBP18.06■□□□□ 0.48
SSBP4-207ENST00000600244 RAD51BO15315 384 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 AGFG2O95081 481 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 RABIFP47224 123 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 RAD23BP54727 409 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 ADKP55263 362 aaKnown RBP18.06■□□□□ 0.48
SSBP4-207ENST00000600244 SLC8A3P57103 927 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 ZFP36L1Q07352 338 aaKnown RBP18.06■□□□□ 0.48
SSBP4-207ENST00000600244 KNOP1Q1ED39 458 aaKnown RBP18.06■□□□□ 0.48
SSBP4-207ENST00000600244 KRBA2Q6ZNG9 492 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 SCML4Q8N228 414 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 TMEM174Q8WUU8 243 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 BTN2A2Q8WVV5 523 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-207ENST00000600244 TATDN2Q93075 761 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 TMEM159Q96B96 161 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 PAGE5Q96GU1 130 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 FCRL2Q96LA5 508 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-207ENST00000600244 TIGD1Q96MW7 591 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 B3GNT4Q9C0J1 378 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 TCEAL2Q9H3H9 227 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-207ENST00000600244 SPASTQ9UBP0 616 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 MED13Q9UHV7 2174 aa18.06■□□□□ 0.48
SSBP4-207ENST00000600244 TRPM6Q9BX84 2022 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 YY2O15391 372 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 CTSLP07711 333 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 ZNF18P17022 549 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 ELAVL4P26378 380 aaKnown RBP18.05■□□□□ 0.48
SSBP4-207ENST00000600244 NUMBP49757 651 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 OXCT1P55809 520 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 DAOAP59103 153 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 C1orf61Q13536 156 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 DLG2Q15700 870 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 ZNF787Q6DD87 383 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 Q6ZVU0 165 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 RBFAQ8N0V3 343 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 SSC4DQ8WTU2 575 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 TBATAQ96M53 351 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 C7orf25Q9BPX7 421 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 SLC17A9Q9BYT1 436 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 LRRC27Q9C0I9 530 aa18.05■□□□□ 0.48
SSBP4-207ENST00000600244 IPO11Q9UI26 975 aaKnown RBP18.05■□□□□ 0.48
SSBP4-207ENST00000600244 SPENQ96T58 3664 aaKnown RBP18.04■□□□□ 0.48
SSBP4-207ENST00000600244 RP1L1Q8IWN7 2480 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-207ENST00000600244 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 PCDH8O95206 1070 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 PAK4O96013 591 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-207ENST00000600244 RNF224P0DH78 156 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 CCDC15Q0P6D6 951 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 PDE1CQ14123 709 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-207ENST00000600244 ACCSLQ4AC99 568 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 FHL5Q5TD97 284 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
SSBP4-207ENST00000600244 SLC9A9Q8IVB4 645 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 ELOA2Q8IYF1 753 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-207ENST00000600244 CEP57L1Q8IYX8 460 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 SDR16C5Q8N3Y7 309 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 TAS1R2Q8TE23 839 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 CCDC74AQ96AQ1 378 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 ALG14Q96F25 216 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 SLC39A13Q96H72 371 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 KLF6Q99612 283 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-207ENST00000600244 EPAS1Q99814 870 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 IMPG2Q9BZV3 1241 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 CLPBQ9H078 707 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 CNGB3Q9NQW8 809 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 UNC13CQ8NB66 2214 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 ITPR3Q14573 2671 aa18.04■□□□□ 0.48
SSBP4-207ENST00000600244 CRYBG3Q68DQ2 2970 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 RNF103O00237 685 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 GABBR2O75899 941 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 RPLP0P05388 317 aaKnown RBP18.03■□□□□ 0.48
SSBP4-207ENST00000600244 ANXA6P08133 673 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 PDGFRAP16234 1089 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 TNFRSF8P28908 595 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 NOS2P35228 1153 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 AMPD3Q01432 767 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 PRRT3Q5FWE3 981 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 LGI2Q8N0V4 545 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 GOLGA5Q8TBA6 731 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 KCTD13Q8WZ19 329 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 NKD1Q969G9 470 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 CATSPER2Q96P56 530 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 PHF12Q96QT6 1004 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 LRRC61Q9BV99 259 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 CPEB1Q9BZB8 566 aaKnown RBP18.03■□□□□ 0.48
SSBP4-207ENST00000600244 LRRN3Q9H3W5 708 aa18.03■□□□□ 0.48
SSBP4-207ENST00000600244 XPO7Q9UIA9 1087 aaKnown RBP18.03■□□□□ 0.48
SSBP4-207ENST00000600244 PNMA8BQ9ULN7 279 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms