RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 TCRBV21S2A2A0A5A6 115 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 ANTXRLA6NF34 631 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 MTSS1O43312 755 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 ZNF217O75362 1048 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 WASP42768 502 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 MAPK8P45983 427 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 CSNK1DP48730 415 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 SNRPD1P62314 119 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 GBE1Q04446 702 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 CSTF1Q05048 431 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 XRCC4Q13426 336 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 GRM3Q14832 879 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 SEL1L2Q5TEA6 688 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 FAM46CQ5VWP2 391 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 LINGO4Q6UY18 593 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 C11orf74Q86VG3 221 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 WDR5BQ86VZ2 330 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 LONP2Q86WA8 852 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 OR8D1Q8WZ84 308 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 OLFM3Q96PB7 478 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 PSKH2Q96QS6 385 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 FERMT1Q9BQL6 677 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 ZDHHC4Q9NPG8 344 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 ZSCAN32Q9NX65 697 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 TRMT1Q9NXH9 659 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 SEPT3Q9UH03 358 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 PYCARDQ9ULZ3 195 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 ARIH1Q9Y4X5 557 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 PCDHGA2Q9Y5H1 932 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 HEY1Q9Y5J3 304 aa16.86■□□□□ 0.29
SHKBP1-219ENST00000599575 HACD1B0YJ81 288 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 J3KR12 359 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 MATN3O15232 486 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 SMAD6O43541 496 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 SIN3BO75182 1162 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 TMCC1O94876 653 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 ADH1BP00325 375 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 PRNPP04156 253 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 KRT10P13645 584 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 HLA-EP13747 358 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 CES1P23141 567 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 COPAP53621 1224 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 RAD51Q06609 339 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 CCDC15Q0P6D6 951 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 CARD16Q5EG05 197 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 RALGPS1Q5JS13 557 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 CCDC181Q5TID7 509 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 MARC1Q5VT66 337 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 ZNF776Q68DI1 518 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 KIAA1211LQ6NV74 962 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 ZC3H14Q6PJT7 736 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 TMPRSS6Q8IU80 811 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 TMIEQ8NEW7 156 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 OR2AP1Q8NGE2 309 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 OR2A12Q8NGT7 310 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 PRCCQ92733 491 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 TRIM44Q96DX7 344 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 SIPA1Q96FS4 1042 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 MRGPRX1Q96LB2 322 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 GDAP1L1Q96MZ0 367 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 TLR10Q9BXR5 811 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 FRMD8P1Q9BZ68 369 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 C2orf42Q9NWW7 574 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 PACSIN2Q9UNF0 486 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 HCN4Q9Y3Q4 1203 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 MFHAS1Q9Y4C4 1052 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 CHD5Q8TDI0 1954 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
SHKBP1-219ENST00000599575 MUC22E2RYF6 1773 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 C1QTNF3-AMACRE9PGA6 284 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 K7ERQ8 282 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 AXIN1O15169 862 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 ZNF821O75541 412 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 POP4O95707 220 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 IGSF6O95976 241 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 SP9P0CG40 484 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 GABRG2P18507 467 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 COL9A1P20849 921 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 PTPN5P54829 565 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 RHOAP61586 193 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 SLC10A2Q12908 348 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 LBRQ14739 615 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 TTC31Q49AM3 519 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 USP39Q53GS9 565 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 ZNF569Q5MCW4 686 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 KAZNQ674X7 775 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 ANO7Q6IWH7 933 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 Q6ZVU0 165 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 KBTBD6Q86V97 674 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 TEX26Q8N6G2 289 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 ZBTB44Q8NCP5 570 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 MDGA1Q8NFP4 955 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 MAIP1Q8WWC4 291 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 MAML1Q92585 1016 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 HAUS1Q96CS2 278 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 HHIPQ96QV1 700 aa16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 CINPQ9BW66 212 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-219ENST00000599575 OSBPL1AQ9BXW6 950 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms