RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FGF13Q92913 245 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 LRRC39Q96DD0 335 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 ASB16Q96NS5 453 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 SLC25A51Q9H1U9 297 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 LRRC4CQ9HCJ2 640 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 AAR2Q9Y312 384 aaKnown RBP21.16■□□□□ 0.98
PNKP-203ENST00000593946 DENND4AQ7Z401 1863 aa21.16■□□□□ 0.98
PNKP-203ENST00000593946 GOLGA6CA6NDK9 693 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 ANXA9O76027 345 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 ABHD2P08910 425 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 GOLGA6DP0CG33 693 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 ELK3P41970 407 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 ZNF844Q08AG5 666 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 SPARCL1Q14515 664 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 DNAJC21Q5F1R6 531 aaKnown RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 TMEM25Q86YD3 366 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 PGBD5Q8N414 524 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 SPATA22Q8NHS9 363 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 FIBINQ8TAL6 211 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 LRRC3BQ96PB8 259 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 LRRC40Q9H9A6 602 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 GOLGA6AQ9NYA3 693 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 GDE1Q9NZC3 331 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 UBA2Q9UBT2 640 aaPredicted RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 BRWD1Q9NSI6 2320 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 ANKRD36A6QL64 1941 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 CBX4O00257 560 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 SLC9A3R1O14745 358 aaPredicted RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 PSMD3O43242 534 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 SYF2O95926 243 aaKnown RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 PENKP01210 267 aaPredicted RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 CSKP41240 450 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 RFTN1Q14699 578 aaPredicted RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 FAM78AQ5JUQ0 283 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 GET4Q7L5D6 327 aaPredicted RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 IGDCC3Q8IVU1 814 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 IRF7Q92985 503 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 RSPRY1Q96DX4 576 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 IMP4Q96G21 291 aaKnown RBP21.15■□□□□ 0.98
PNKP-203ENST00000593946 SIGLEC10Q96LC7 697 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 LINC00597Q9H2U6 94 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 MED4Q9NPJ6 270 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 SPHK2Q9NRA0 654 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 UBP1Q9NZI7 540 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 CLEC1BQ9P126 229 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 CLEC4EQ9ULY5 219 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 CHMP2BQ9UQN3 213 aa21.15■□□□□ 0.98
PNKP-203ENST00000593946 H3BQF6 201 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 ZMPSTE24O75844 475 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 MT-CYBP00156 380 aaPredicted RBP21.14■□□□□ 0.97
PNKP-203ENST00000593946 GEMP55040 296 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 ARF5P84085 180 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 OLIG2Q13516 323 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 ZNF235Q14590 738 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 CEP85LQ5SZL2 805 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 ALG1LQ6GMV1 187 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 CCDC117Q8IWD4 279 aaPredicted RBP21.14■□□□□ 0.97
PNKP-203ENST00000593946 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.14■□□□□ 0.97
PNKP-203ENST00000593946 DCAF4L2Q8NA75 395 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 ATP11CQ8NB49 1132 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 UHMK1Q8TAS1 419 aaKnown RBP21.14■□□□□ 0.97
PNKP-203ENST00000593946 SMARCD2Q92925 531 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 CASS4Q9NQ75 786 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 VPS28Q9UK41 221 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 WNT6Q9Y6F9 365 aa21.14■□□□□ 0.97
PNKP-203ENST00000593946 MYLKQ15746 1914 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 TMEM265A0A087WTH1 108 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 A0A1W2PPC1 479 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 OPA1O60313 960 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 TSHRP16473 764 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 GPX6P59796 221 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 MAXP61244 160 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 IFFO1Q0D2I5 559 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 CTC1Q2NKJ3 1217 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 PRPF39Q86UA1 669 aaKnown RBP21.13■□□□□ 0.97
PNKP-203ENST00000593946 ADGRG2Q8IZP9 1017 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 TMEM109Q9BVC6 243 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 TTYH1Q9H313 450 aaPredicted RBP21.13■□□□□ 0.97
PNKP-203ENST00000593946 TRPV4Q9HBA0 871 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 KIAA1522Q9P206 1035 aaPredicted RBP21.13■□□□□ 0.97
PNKP-203ENST00000593946 SEPT3Q9UH03 358 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 ACTL7AQ9Y615 435 aa21.13■□□□□ 0.97
PNKP-203ENST00000593946 MUSKO15146 869 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 SNAP91O60641 907 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 USP12O75317 370 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 TBX10O75333 385 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 CD160O95971 181 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 MMP2P08253 660 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 VIPR2P41587 438 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 NIPAL4Q0D2K0 466 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 LMAN2Q12907 356 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 NAPEPLDQ6IQ20 393 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 BBS5Q8N3I7 341 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 OR52K1Q8NGK4 314 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 ARRDC2Q8TBH0 407 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 TADA1Q96BN2 335 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 LMLNQ96KR4 655 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 PSKH2Q96QS6 385 aa21.12■□□□□ 0.97
PNKP-203ENST00000593946 MGME1Q9BQP7 344 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms