RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 E2F1Q01094 437 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 INSM1Q01101 510 aaPredicted RBP23.16■■□□□ 1.3
SSBP4-203ENST00000593641 ZNF284Q2VY69 593 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 SLC25A52Q3SY17 297 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 ERN2Q76MJ5 926 aaKnown RBP23.16■■□□□ 1.3
SSBP4-203ENST00000593641 ZNF683Q8IZ20 524 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 CACTIN-AS1Q8N1I8 211 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 CHST14Q8NCH0 376 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 TBCBQ99426 244 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 TNKS2Q9H2K2 1166 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 MPP6Q9NZW5 540 aa23.16■■□□□ 1.3
SSBP4-203ENST00000593641 I6L893 689 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-203ENST00000593641 TRIM38O00635 465 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 TLX3O43711 291 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-203ENST00000593641 PRKCSHP14314 528 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-203ENST00000593641 CDH5P33151 784 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-203ENST00000593641 ARSIQ5FYB1 569 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 RETSATQ6NUM9 610 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 ERICH1Q86X53 443 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 SLC25A45Q8N413 288 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 MSANTD4Q8NCY6 345 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 OR4C6Q8NH72 309 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 SPON2Q9BUD6 331 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 HDAC8Q9BY41 377 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 NDST4Q9H3R1 872 aa23.15■■□□□ 1.3
SSBP4-203ENST00000593641 IGLV3-10A0A075B6K4 115 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 FFAR2O15552 330 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 SRGAP2O75044 1071 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 ALPPL2P10696 532 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 CYP11B1P15538 503 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 ITPKBP27987 946 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 GABRB2P47870 512 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 DRAP1Q14919 205 aaPredicted RBP23.14■■□□□ 1.29
SSBP4-203ENST00000593641 VWA3BQ502W6 1294 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 ZNF783Q6ZMS7 281 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 DPY19L3Q6ZPD9 716 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 XYLT1Q86Y38 959 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 DCBLD1Q8N8Z6 715 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 OR13H1Q8NG92 308 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 OR7D4Q8NG98 312 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 FAM174AQ8TBP5 190 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 UBL7Q96S82 380 aaPredicted RBP23.14■■□□□ 1.29
SSBP4-203ENST00000593641 TMPRSS4Q9NRS4 437 aa23.14■■□□□ 1.29
SSBP4-203ENST00000593641 ILVBLA1L0T0 632 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 BRINP1O60477 761 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 LEFTY1O75610 366 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 ENDOD1O94919 500 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 NEK3P51956 506 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 CLDN2P57739 230 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 TAF3Q5VWG9 929 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 SEL1L3Q68CR1 1132 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 PTAR1Q7Z6K3 402 aaPredicted RBP23.13■■□□□ 1.29
SSBP4-203ENST00000593641 SNIP1Q8TAD8 396 aaKnown RBP23.13■■□□□ 1.29
SSBP4-203ENST00000593641 HAPLN3Q96S86 360 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 CEP44Q9C0F1 390 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 ATP13A1Q9HD20 1204 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 UCKL1Q9NWZ5 548 aa23.13■■□□□ 1.29
SSBP4-203ENST00000593641 ZFR2Q9UPR6 939 aaKnown RBP23.13■■□□□ 1.29
SSBP4-203ENST00000593641 A6NNZ2 444 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 GOLGA8SH3BPF8 625 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 PES1O00541 588 aaKnown RBP23.12■■□□□ 1.29
SSBP4-203ENST00000593641 PIAS2O75928 621 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 LSM8O95777 96 aaKnown RBP23.12■■□□□ 1.29
SSBP4-203ENST00000593641 MT-CO3P00414 261 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 ACTN2P35609 894 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 FLT3P36888 993 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 SERPINH1P50454 418 aaKnown RBP23.12■■□□□ 1.29
SSBP4-203ENST00000593641 SLC20A2Q08357 652 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 KIAA1161Q6NSJ0 714 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 KDM7AQ6ZMT4 941 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 GCNT7Q6ZNI0 430 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 ABI3BPQ7Z7G0 1075 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 PCDH20Q8N6Y1 951 aaKnown RBP23.12■■□□□ 1.29
SSBP4-203ENST00000593641 IFT43Q96FT9 208 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 TUBGCP2Q9BSJ2 902 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 ZYG11BQ9C0D3 744 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 EVA1BQ9NVM1 165 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 FHOD1Q9Y613 1164 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 WASF2Q9Y6W5 498 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 CHD5Q8TDI0 1954 aa23.12■■□□□ 1.29
SSBP4-203ENST00000593641 FAM170AA1A519 330 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 NEMP2A6NFY4 417 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 ITGB7P26010 798 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 DNA2P51530 1060 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 RPS21P63220 83 aaKnown RBP23.11■■□□□ 1.29
SSBP4-203ENST00000593641 MAPK8IP2Q13387 824 aaPredicted RBP23.11■■□□□ 1.29
SSBP4-203ENST00000593641 TMEM259Q4ZIN3 620 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 TMC6Q7Z403 805 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 FAM131BQ86XD5 332 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 DCP2Q8IU60 420 aaKnown RBP23.11■■□□□ 1.29
SSBP4-203ENST00000593641 SLC22A18ASQ8N1D0 253 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 FGF11Q92914 225 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 CFAP57Q96MR6 1250 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 HEPHQ9BQS7 1158 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 DNAJC28Q9NX36 388 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 NLGN3Q9NZ94 848 aa23.11■■□□□ 1.29
SSBP4-203ENST00000593641 GCN1Q92616 2671 aaKnown RBP23.11■■□□□ 1.29
SSBP4-203ENST00000593641 RNF103O00237 685 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 CKMT1AP12532 417 aa23.1■■□□□ 1.29
SSBP4-203ENST00000593641 ADRB3P13945 408 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms