RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ATP13A1Q9HD20 1204 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 RRAGDQ9NQL2 400 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-220ENST00000593008 NCDNQ9UBB6 729 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 FBXO10Q9UK96 956 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 RAB23Q9ULC3 237 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 MMP17Q9ULZ9 603 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 SAR1BQ9Y6B6 198 aa9.85□□□□□ -0.83
DDX39A-220ENST00000593008 GVINP1Q7Z2Y8 2422 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 ILVBLA1L0T0 632 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF487B1APH4 448 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 KCNK1O00180 336 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 RNF103O00237 685 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 CBX4O00257 560 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 PGRMC1O00264 195 aaKnown RBP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 MUSKO15146 869 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 RPP40O75818 363 aaKnown RBP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 HLA-EP13747 358 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 HTR7P34969 479 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 ETFBP38117 255 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 RGRP47804 291 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 KCNJ1P48048 391 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 COPS2P61201 443 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 SERINC3Q13530 473 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 POLD3Q15054 466 aaPredicted RBP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 NOMO1Q15155 1222 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 PTPRNQ16849 979 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 EOGTQ5NDL2 527 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 CCDC181Q5TID7 509 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 IL31Q6EBC2 164 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 NUDT18Q6ZVK8 323 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 KIAA0907Q7Z7F0 614 aaPredicted RBP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 KIAA2013Q8IYS2 634 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 CHPFQ8IZ52 775 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 ATPAF2Q8N5M1 289 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 CAMKK1Q8N5S9 505 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 GLIS1Q8NBF1 620 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 MDGA1Q8NFP4 955 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 RUBCNQ92622 972 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 PBKQ96KB5 322 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 EXOC2Q96KP1 924 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 MRGPRX3Q96LB0 322 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 NSMCE3Q96MG7 304 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 QKIQ96PU8 341 aaKnown RBP eCLIP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 MAK16Q9BXY0 300 aaKnown RBP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 ACE2Q9BYF1 805 aaPredicted RBP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 PDFQ9HBH1 243 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 CACNA2D2Q9NY47 1150 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 DNPEPQ9ULA0 475 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 FCF1Q9Y324 198 aaKnown RBP9.84□□□□□ -0.83
DDX39A-220ENST00000593008 RAD54BQ9Y620 910 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 CHD5Q8TDI0 1954 aa9.84□□□□□ -0.83
DDX39A-220ENST00000593008 FAM186AA6NE01 2351 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 NUP205Q92621 2012 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 ZNF292O60281 2723 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 TCRBV21S2A2A0A5A6 115 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 TTC34A8MYJ7 566 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 WASH3PC4AMC7 463 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 APOC4-APOC2K7ER74 178 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 MAFKO60675 156 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 APOC2P02655 101 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 HOXB2P14652 356 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 ETS1P14921 441 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 TCP1P17987 556 aaKnown RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 TGM2P21980 687 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 PRKCHP24723 683 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 RBL1P28749 1068 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 CNR2P34972 360 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 GARSP41250 739 aaKnown RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 CLCN6P51797 869 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 NDST2P52849 883 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 OXCT1P55809 520 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 EIF3EP60228 445 aaKnown RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 SLC10A7Q0GE19 358 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 TFDP2Q14188 446 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 IHHQ14623 411 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 PRKD1Q15139 912 aaPredicted RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 KIAA1211LQ6NV74 962 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 SETD3Q86TU7 594 aaPredicted RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 KBTBD6Q86V97 674 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 VSIG1Q86XK7 387 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 CACUL1Q86Y37 369 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 PGBD3Q8N328 593 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 PGBD5Q8N414 524 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 FAM160A2Q8N612 972 aaPredicted RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 DCAF4L2Q8NA75 395 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 OR6K2Q8NGY2 324 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 SLC35B2Q8TB61 432 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 HMGB4Q8WW32 186 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 GAB3Q8WWW8 586 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 RLN3Q8WXF3 142 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 MYO19Q96H55 970 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 DDX47Q9H0S4 455 aaKnown RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 TNKS2Q9H2K2 1166 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 SEPT10Q9P0V9 454 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 KIAA1522Q9P206 1035 aaPredicted RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 BCCIPQ9P287 314 aaKnown RBP eCLIP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 EBF1Q9UH73 591 aa9.83□□□□□ -0.84
DDX39A-220ENST00000593008 IPO11Q9UI26 975 aaKnown RBP9.83□□□□□ -0.84
DDX39A-220ENST00000593008 SLCO3A1Q9UIG8 710 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms