RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PPIDQ08752 370 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 TTLL4Q14679 1199 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 GRM3Q14832 879 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 DCAF6Q58WW2 860 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 PDZD4Q76G19 769 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 BEST2Q8NFU1 509 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 ADAM32Q8TC27 787 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 SNX27Q96L92 541 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 MLPHQ9BV36 600 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 NSMCE4AQ9NXX6 385 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 UTP6Q9NYH9 597 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 SLC39A10Q9ULF5 831 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 STX16-NPEPL1H3BU86 382 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 XPO1O14980 1071 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 USP2O75604 605 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 RNASEH2AO75792 299 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 LGALS2P05162 132 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 COL6A2P12110 1019 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 CD68P34810 354 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 KIZQ2M2Z5 673 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 C9orf57Q5W0N0 161 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 ZC3HC1Q86WB0 502 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 SLC2A14Q8TDB8 520 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 NDRG1Q92597 394 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 FAM149B1Q96BN6 582 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 MAELQ96JY0 434 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 DNAI2Q9GZS0 605 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 RHOJQ9H4E5 214 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 TIMMDC1Q9NPL8 285 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 PDGFCQ9NRA1 345 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 CHRAC1Q9NRG0 131 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 CIDEBQ9UHD4 219 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 PPP2R3BQ9Y5P8 575 aa15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 COPG1Q9Y678 874 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-219ENST00000592604 TRIM38O00635 465 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 NCAM2O15394 837 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 ZBTB24O43167 697 aaPredicted RBP15.08■□□□□ 0
SMARCA4-219ENST00000592604 USP46P62068 366 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 GALNT4Q8N4A0 578 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 RNF148Q8N7C7 305 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 C18orf25Q96B23 403 aaPredicted RBP15.08■□□□□ 0
SMARCA4-219ENST00000592604 DNAJC1Q96KC8 554 aaKnown RBP15.08■□□□□ 0
SMARCA4-219ENST00000592604 TSNARE1Q96NA8 513 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 GBA3Q9H227 469 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 PREBQ9HCU5 417 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 ACSS2Q9NR19 701 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 SNTG2Q9NY99 539 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 THEGQ9P2T0 379 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 COL1A2P08123 1366 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 TSC2P49815 1807 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 CCDC160A6NGH7 325 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 JUNP05412 331 aaKnown RBP15.08■□□□□ 0
SMARCA4-219ENST00000592604 ERCC2P18074 760 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 MAGEA10P43363 369 aaPredicted RBP15.08■□□□□ 0
SMARCA4-219ENST00000592604 HPCAP84074 193 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 PPP2R5DQ14738 602 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 ISLR2Q6UXK2 745 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 PIGZQ86VD9 579 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 CHERPQ8IWX8 916 aaKnown RBP15.08■□□□□ 0
SMARCA4-219ENST00000592604 KDM1BQ8NB78 822 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 BRD8Q9H0E9 1235 aa15.08■□□□□ 0
SMARCA4-219ENST00000592604 RUVBL2Q9Y230 463 aaKnown RBP15.08■□□□□ 0
SMARCA4-219ENST00000592604 M0QYT0 321 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 VAPBO95292 243 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 SLC35E2BP0CK96 405 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 TXNL4AP83876 142 aaKnown RBP15.07■□□□□ 0
SMARCA4-219ENST00000592604 ARHGAP1Q07960 439 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 SLC12A1Q13621 1099 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 VGLL4Q14135 290 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 MGAT5BQ3V5L5 792 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 NXNQ6DKJ4 435 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 KLC3Q6P597 504 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 FSTL5Q8N475 847 aaPredicted RBP15.07■□□□□ 0
SMARCA4-219ENST00000592604 WNT8BQ93098 351 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 ASB9Q96DX5 294 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 SLC9A7Q96T83 725 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 GALNT8Q9NY28 637 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 TRHDEQ9UKU6 1024 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 STAP1Q9ULZ2 295 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 CEPT1Q9Y6K0 416 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 MTSS1O43312 755 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 DLX3O60479 287 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 ADIGQ0VDE8 80 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 SEMA3BQ13214 749 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 ALKAL1Q6UXT8 129 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 CENPLQ8N0S6 344 aaPredicted RBP15.07■□□□□ 0
SMARCA4-219ENST00000592604 TOP1MTQ969P6 601 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 ZNF597Q96LX8 424 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 SLC2A13Q96QE2 648 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 MRPL1Q9BYD6 325 aaKnown RBP15.07■□□□□ 0
SMARCA4-219ENST00000592604 EPS15L1Q9UBC2 864 aa15.07■□□□□ 0
SMARCA4-219ENST00000592604 MYOCOSA0A1B0GUC4 107 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 FZD9O00144 591 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 PIRO00625 290 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 C8BP07358 591 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 CDK4P11802 303 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 PSMC3P17980 439 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 NMBRP28336 390 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 SLC5A2P31639 672 aa15.06■□□□□ 0
SMARCA4-219ENST00000592604 ADRA1BP35368 520 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms