RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	PPP1R2	P41236	205 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	MORC3	Q14149	939 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	PTPN20	Q4JDL3	420 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	OR6B2	Q6IFH4	312 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	TRIM65	Q6PJ69	517 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	ERN2	Q76MJ5	926 aa	Known RBP	18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	SLC26A9	Q7LBE3	791 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	ELOA2	Q8IYF1	753 aa	Predicted RBP	18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	FAM181A	Q8N9Y4	354 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	C1orf131	Q8NDD1	294 aa	Known RBP	18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	GRIN3A	Q8TCU5	1115 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	IFT43	Q96FT9	208 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	DEPDC7	Q96QD5	511 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	HDAC8	Q9BY41	377 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	SEMA4C	Q9C0C4	833 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	TNKS2	Q9H2K2	1166 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	TMPRSS4	Q9NRS4	437 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	ARHGEF38	Q9NXL2	777 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	AJAP1	Q9UKB5	411 aa	Predicted RBP	18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	HECTD1	Q9ULT8	2610 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	PCDHGC3	Q9UN70	934 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	SSUH2	Q9Y2M2	353 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	WASF2	Q9Y6W5	498 aa		18.7	■□□□□ 0.58
CIRBP-238	ENST00000592412	POM121B	A6NF01	834 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412		M0QYT0	321 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	RAD51B	O15315	384 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	GNA14	O95837	355 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	RHOC	P08134	193 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	SLC9A1	P19634	815 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	LSS	P48449	732 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	KRT83	P78385	493 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	FZD2	Q14332	565 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	ARHGAP44	Q17R89	818 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	ARSI	Q5FYB1	569 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	TPRG1L	Q5T0D9	272 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	C22orf39	Q6P5X5	142 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	DPY19L3	Q6ZPD9	716 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412		Q6ZSR6	202 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	ENOSF1	Q7L5Y1	443 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	DCAF4L2	Q8NA75	395 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	ZNF548	Q8NEK5	533 aa	Predicted RBP	18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	SHC3	Q92529	594 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	NPY6R	Q99463	290 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	SRRT	Q9BXP5	876 aa	Known RBP	18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	OSBPL2	Q9H1P3	480 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	POLR1B	Q9H9Y6	1135 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	DNAJC28	Q9NX36	388 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	ZNF212	Q9UDV6	495 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	KLF15	Q9UIH9	416 aa		18.69	■□□□□ 0.58
CIRBP-238	ENST00000592412	TRPM6	Q9BX84	2022 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	BICDL2	A1A5D9	508 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	DRGX	A6NNA5	263 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	LEFTY1	O75610	366 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	PCDH8	O95206	1070 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	PRNP	P04156	253 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	TGM2	P21980	687 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	NOS2	P35228	1153 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	CXCR3	P49682	368 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	TMPRSS3	P57727	454 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	ERVPABLB-1	P60509	514 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	SLC6A3	Q01959	620 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	HS1BP3	Q53T59	392 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	ARHGAP40	Q5TG30	622 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	PTAR1	Q7Z6K3	402 aa	Predicted RBP	18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	ZNF397	Q8NF99	534 aa	Predicted RBP	18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	IFI44	Q8TCB0	444 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	TKTL2	Q9H0I9	626 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	MPP6	Q9NZW5	540 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	IL36A	Q9UHA7	158 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	BSN	Q9UPA5	3926 aa		18.68	■□□□□ 0.58
CIRBP-238	ENST00000592412	GOLGA6L4	A6NEF3	574 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412		A6NNZ2	444 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	BIN1	O00499	593 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	CASC3	O15234	703 aa	Known RBP	18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	ZMPSTE24	O75844	475 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	ENDOD1	O94919	500 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	CSF2	P04141	144 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	ALPPL2	P10696	532 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	NME1	P15531	152 aa	Known RBP	18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	USP8	P40818	1118 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	CLCN6	P51797	869 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	SKOR1	P84550	965 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	MTA1	Q13330	715 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	ISX	Q2M1V0	245 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	KYAT3	Q6YP21	454 aa	Known RBP	18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	TFAP2D	Q7Z6R9	452 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	SETD3	Q86TU7	594 aa	Predicted RBP	18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	LSMEM2	Q8N112	164 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	OR7D4	Q8NG98	312 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	SNRNP27	Q8WVK2	155 aa	Known RBP	18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	TTC9	Q92623	222 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	NT5C3B	Q969T7	300 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	VOPP1	Q96AW1	172 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	VCPIP1	Q96JH7	1222 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	CCDC114	Q96M63	670 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	SLC17A9	Q9BYT1	436 aa		18.67	■□□□□ 0.58
CIRBP-238	ENST00000592412	APEX2	Q9UBZ4	518 aa		18.67	■□□□□ 0.58

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