RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TBL1XO60907 577 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 BAIAP3O94812 1187 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ICAM3P32942 547 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 BRCC3P46736 316 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 NAA20P61599 178 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 PGS1Q32NB8 556 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ARMC4Q5T2S8 1044 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 CREG2Q8IUH2 290 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 NPAS4Q8IUM7 802 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 RIPOR3Q96MK2 946 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 NXF3Q9H4D5 531 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 PARVBQ9HBI1 364 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 KLHL28Q9NXS3 571 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 TBC1D14Q9P2M4 693 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 KLHL20Q9Y2M5 609 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 CENPXA8MT69 81 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 MIPP30301 263 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 PRKCIP41743 596 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 PIK3CGP48736 1102 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 BOP1Q14137 746 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ANGPT1Q15389 498 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 USP39Q53GS9 565 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF662Q6ZS27 426 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 CHMP1BQ7LBR1 199 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 CPA6Q8N4T0 437 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ACTR8Q9H981 624 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 ITGB1BP2Q9UKP3 347 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 PHGDHO43175 533 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 FAM20BO75063 409 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 KATNA1O75449 491 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 BMP10O95393 424 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 HTR1BP28222 390 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 PPIDQ08752 370 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 DGUOKQ16854 277 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 KRT73Q86Y46 540 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 SLC9A9Q8IVB4 645 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 OR56A4Q8NGH8 313 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 MAGEC3Q8TD91 643 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 SERAC1Q96JX3 654 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 DUSP9Q99956 384 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 NDOR1Q9UHB4 597 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 MRPS17Q9Y2R5 130 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 BAZ2BQ9UIF8 2168 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-216ENST00000591545 BTNL10A8MVZ5 291 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 APOC4-APOC2K7ER74 178 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 RAD51BO15315 384 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 TLR5O60602 858 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 APOC2P02655 101 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 SNHG28P0DPA3 235 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 TNNI3P19429 210 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 CTU1Q7Z7A3 348 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 WDR48Q8TAF3 677 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 ACTRT2Q8TDY3 377 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 BRI3BPQ8WY22 251 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 RORBQ92753 470 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 FANCEQ9HB96 536 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 A0A087X1B8 175 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 ERI2A8K979 691 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 DDX3XO00571 662 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 SMPD1P17405 629 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 PSMB9P28065 219 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 PEX6Q13608 980 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 INAQ16352 499 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 RIPOR1Q6ZS17 1223 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 MIER2Q8N344 545 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 MIEF2Q96C03 454 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 ZYG11BQ9C0D3 744 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 RAD21L1Q9H4I0 556 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 ABHD2P08910 425 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 PCNAP12004 261 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 TNFSF9P41273 254 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 RFX3P48380 749 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 PPP3CAQ08209 521 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 CBWD6Q4V339 395 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 VSTM1Q6UX27 236 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 MON1AQ86VX9 555 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 LRRC49Q8IUZ0 686 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 OR8H2Q8N162 312 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 FBXO39Q8N4B4 442 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 DHRSXQ8N5I4 330 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 GRIN3AQ8TCU5 1115 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 CKAP2Q8WWK9 683 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 DAPK2Q9UIK4 370 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 PNMA8BQ9ULN7 279 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 TDRKHQ9Y2W6 561 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 A0A096LPK6 155 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 CPSF4O95639 269 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 PIK3R1P27986 724 aa13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 SERPINH1P50454 418 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-216ENST00000591545 FPGSQ05932 587 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms