RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 MS4A13Q5J8X5 152 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 TMEM201Q5SNT2 666 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 ADGRF1Q5T601 910 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 GRAMD4Q6IC98 578 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 NLRC3Q7RTR2 1065 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 DAAM2Q86T65 1068 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 C12orf40Q86WS4 652 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 MFN1Q8IWA4 741 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 CFAP52Q8N1V2 620 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 SYNPOQ8N3V7 929 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 CPXM2Q8N436 756 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 CARNMT1Q8N4J0 409 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 FLCNQ8NFG4 579 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 FNIP1Q8TF40 1166 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 ATRIPQ8WXE1 791 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 NT5C3BQ969T7 300 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 TBC1D31Q96DN5 1066 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 CHFRQ96EP1 664 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 MYEOVQ96EZ4 313 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 WDR89Q96FK6 387 aaPredicted RBP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 PGAP3Q96FM1 320 aaPredicted RBP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 ZNF830Q96NB3 372 aaPredicted RBP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 XPO6Q96QU8 1125 aaKnown RBP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 TSGA10Q9BZW7 698 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 FOXQ1Q9C009 403 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 KCNF1Q9H3M0 494 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 DHX35Q9H5Z1 703 aaKnown RBP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 C8orf33Q9H7E9 229 aaPredicted RBP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 ANLNQ9NQW6 1124 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 ARHGEF4Q9NR80 690 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 ARHGEF38Q9NXL2 777 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 HYOU1Q9Y4L1 999 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 HS3ST4Q9Y661 456 aa6.59□□□□□ -1.35
VPS4B-205ENST00000591383 MUC22E2RYF6 1773 aaPredicted RBP6.59□□□□□ -1.35
VPS4B-205ENST00000591383 DOCK4Q8N1I0 1966 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 KMT2EQ8IZD2 1858 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 A0A0A6YYK5 440 aaPredicted RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 A0A1B0GVM2 712 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 TCAF2A6NFQ2 919 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 TMEM221A6NGB7 291 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 E9PAM4 449 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 H0Y626 953 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 I6L893 689 aaPredicted RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 M0R296 226 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 TNFRSF10CO14798 259 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 CACNG3O60359 315 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 SRGAP2O75044 1071 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 MTA2O94776 668 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 MOCS3O95396 460 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 PENKP01210 267 aaPredicted RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 APODP05090 189 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 FAM153BP0C7A2 387 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 ALAS2P22557 587 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 MAN1A1P33908 653 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 ADRA1BP35368 520 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 MAP2K3P46734 347 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 DGKGP49619 791 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 DNA2P51530 1060 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 AMPD2Q01433 879 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 SLC25A11Q02978 314 aaKnown RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 PRKCQQ04759 706 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 SCAPQ12770 1279 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 MTA1Q13330 715 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 AUHQ13825 339 aaKnown RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 LAPTM4AQ15012 233 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 HADHQ16836 314 aaKnown RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 GAB4Q2WGN9 574 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 SLC44A4Q53GD3 710 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 ODF2Q5BJF6 829 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 KCNT1Q5JUK3 1230 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 FYB2Q5VWT5 728 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 C11orf63Q6NUN7 778 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 RHBDF2Q6PJF5 856 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 LRRC31Q6UY01 552 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF852Q6ZMS4 543 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 C20orf204Q6ZNR8 217 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 BNIPLQ7Z465 357 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 ANKS1BQ7Z6G8 1248 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 SLFN11Q7Z7L1 901 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 C14orf80Q86SX3 495 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 RALGPS2Q86X27 583 aaPredicted RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF354CQ86Y25 554 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 FAM217AQ8IXS0 508 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 PYROXD2Q8N2H3 581 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 KIAA1958Q8N8K9 716 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 NIPA2Q8N8Q9 360 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 WFDC5Q8TCV5 224 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 FAM3CQ92520 227 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 CENPIQ92674 756 aaPredicted RBP6.58□□□□□ -1.36
VPS4B-205ENST00000591383 EDAQ92838 391 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 CD101Q93033 1021 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 EXOC4Q96A65 974 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 NTAN1Q96AB6 310 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 MSANTD3Q96H12 275 aa6.58□□□□□ -1.36
VPS4B-205ENST00000591383 P2RY13Q9BPV8 354 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms