RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	ZCCHC17	Q9NP64	241 aa	Known RBP	5.24	□□□□□ -1.57
ATP9B-223	ENST00000590608	SH3GLB2	Q9NR46	395 aa		5.24	□□□□□ -1.57
ATP9B-223	ENST00000590608	BABAM1	Q9NWV8	329 aa		5.24	□□□□□ -1.57
ATP9B-223	ENST00000590608	EHD2	Q9NZN4	543 aa		5.24	□□□□□ -1.57
ATP9B-223	ENST00000590608	CHORDC1	Q9UHD1	332 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP9B-223	ENST00000590608	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP9B-223	ENST00000590608	MAST3	O60307	1309 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608		A0A0A0MQY5	61 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608		A0A1W2PQF6	199 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	FRMD3	A2A2Y4	597 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	OR6C68	A6NDL8	312 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	CXorf65	A6NEN9	183 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	MYO1G	B0I1T2	1018 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	RRH	O14718	337 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	GCAT	O75600	419 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	IL11	P20809	199 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	MCM3	P25205	808 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	POU1F1	P28069	291 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	NNMT	P40261	264 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	OAZ1	P54368	228 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	RHAG	Q02094	409 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	LARS2	Q15031	903 aa	Known RBP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	RASA2	Q15283	850 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	BMP2KL	Q5H9B9	411 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	LY6G5C	Q5SRR4	150 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	CC2D1B	Q5T0F9	858 aa	Known RBP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	RPUSD3	Q6P087	351 aa	Known RBP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	CRIP3	Q6Q6R5	217 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	CLEC17A	Q6ZS10	378 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	NEK8	Q86SG6	692 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	GPAT4	Q86UL3	456 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	SCML4	Q8N228	414 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	NOC3L	Q8WTT2	800 aa	Known RBP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	ARHGEF2	Q92974	986 aa	Known RBP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	SMARCE1	Q969G3	411 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	ZNF747	Q9BV97	191 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	MAK16	Q9BXY0	300 aa	Known RBP	5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	NUAK2	Q9H093	628 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	SIL1	Q9H173	461 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	IKZF4	Q9H2S9	585 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	ERVK-5	Q9HDB9	667 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	TXNRD2	Q9NNW7	524 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	ARL8B	Q9NVJ2	186 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	TFCP2L1	Q9NZI6	479 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	LRIT1	Q9P2V4	623 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	ICK	Q9UPZ9	632 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	DHDH	Q9UQ10	334 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	DTX4	Q9Y2E6	619 aa		5.23	□□□□□ -1.57
ATP9B-223	ENST00000590608	TCRBV5S1A1T	A0A578	114 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ADAM20	O43506	726 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	DKC1	O60832	514 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	OR2C1	O95371	312 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ENO1	P06733	434 aa	Known RBP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	C6	P13671	934 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ST6GAL1	P15907	406 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ADRA1B	P35368	520 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	MPL	P40238	635 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	PSMB10	P40306	273 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ARL1	P40616	181 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	CDH8	P55286	799 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	EPS8	Q12929	822 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	FOXI1	Q12951	378 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ME3	Q16798	604 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ALG11	Q2TAA5	492 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	EDRF1	Q3B7T1	1238 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	MIIP	Q5JXC2	388 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	FNDC7	Q5VTL7	733 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	SERPINA13P	Q6UXR4	307 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608		Q6YL49	198 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	CHST9	Q7L1S5	443 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	SLC29A4	Q7RTT9	530 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	VRK3	Q8IV63	474 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	LINC00346	Q8IVM7	164 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	KCTD6	Q8NC69	237 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	GDPD5	Q8WTR4	605 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	PABPC5	Q96DU9	382 aa	Known RBP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	HIC2	Q96JB3	615 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	FEM1C	Q96JP0	617 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	GATA5	Q9BWX5	397 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	MLXIPL	Q9NP71	852 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	KIAA1456	Q9P272	454 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	NOL7	Q9UMY1	257 aa	Known RBP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	ZNF711	Q9Y462	761 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	TTBK1	Q5TCY1	1321 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	SPATA31A1	Q5TZJ5	1347 aa		5.22	□□□□□ -1.57
ATP9B-223	ENST00000590608	EIF3CL	B5ME19	914 aa	Known RBP	5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	MGST3	O14880	152 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	AKAP8	O43823	692 aa	Known RBP	5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	PAGE4	O60829	102 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	ENTPD3	O75355	529 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	PEX11B	O96011	259 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	APOA4	P06727	396 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	TUBB	P07437	444 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	TACR2	P21452	398 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	UBA7	P41226	1012 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	CYP4A11	Q02928	519 aa		5.21	□□□□□ -1.58
ATP9B-223	ENST00000590608	GOLGA8DP	Q0D2H9	430 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms