RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 COPAP53621 1224 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 RHOAP61586 193 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 TFDP2Q14188 446 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 USP39Q53GS9 565 aaKnown RBP17.14■□□□□ 0.33
LSM14A-208ENST00000590416 C9orf64Q5T6V5 341 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 CCDC181Q5TID7 509 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 METTL3Q86U44 580 aaKnown RBP17.14■□□□□ 0.33
LSM14A-208ENST00000590416 MMAAQ8IVH4 418 aaKnown RBP17.14■□□□□ 0.33
LSM14A-208ENST00000590416 PCDH20Q8N6Y1 951 aaKnown RBP17.14■□□□□ 0.33
LSM14A-208ENST00000590416 GANCQ8TET4 914 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 FRS2Q8WU20 508 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 SPACA7Q96KW9 195 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 MRGPRX1Q96LB2 322 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 CEP44Q9C0F1 390 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 MKRN2Q9H000 416 aaKnown RBP17.14■□□□□ 0.33
LSM14A-208ENST00000590416 FAM86C1Q9NVL1 165 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 INVSQ9Y283 1065 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 PCDHGA2Q9Y5H1 932 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 R4GN57 208 aa17.14■□□□□ 0.33
LSM14A-208ENST00000590416 CST8O60676 142 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 NEBLO76041 1014 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 CD160O95971 181 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 IL1BP01584 269 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 GBE1Q04446 702 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 IL10RBQ08334 325 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 ELAVL3Q14576 367 aaKnown RBP17.13■□□□□ 0.33
LSM14A-208ENST00000590416 NPNTQ6UXI9 565 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 CEP68Q76N32 757 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 DSG4Q86SJ6 1040 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 PLD5Q8N7P1 536 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 CCNYQ8ND76 341 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 TRIM58Q8NG06 486 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 CASKIN2Q8WXE0 1202 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 RLN3Q8WXF3 142 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 CINPQ9BW66 212 aaPredicted RBP17.13■□□□□ 0.33
LSM14A-208ENST00000590416 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 CD248Q9HCU0 757 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 CYP8B1Q9UNU6 501 aa17.13■□□□□ 0.33
LSM14A-208ENST00000590416 hCG_1818297A0A087WSY0 165 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 CCDC163A0A0D9SF12 145 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 CXorf51AA0A1B0GTR3 108 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 C1QTNF3-AMACRE9PGA6 284 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 RPP40O75818 363 aaKnown RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 IGSF6O95976 241 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 MX2P20592 715 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 GARSP41250 739 aaKnown RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 COPS2P61201 443 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 SNRPD1P62314 119 aaKnown RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 SRSF5Q13243 272 aaKnown RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 PPP2R5EQ16537 467 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 TTC31Q49AM3 519 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 INO80DQ53TQ3 878 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 CARD16Q5EG05 197 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 SEL1L2Q5TEA6 688 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 SLC9A4Q6AI14 798 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 PRR23BQ6ZRT6 265 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 BBS5Q8N3I7 341 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 ALG3Q92685 438 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 HAUS1Q96CS2 278 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 RSPH9Q9H1X1 276 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-208ENST00000590416 ZDHHC6Q9H6R6 413 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 PDFQ9HBH1 243 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 FANCMQ8IYD8 2048 aa17.12■□□□□ 0.33
LSM14A-208ENST00000590416 MID1O15344 667 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 DDX3YO15523 660 aaKnown RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 ZNF217O75362 1048 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 TGM2P21980 687 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 PEX5P50542 639 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 CCNHP51946 323 aaPredicted RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 RPS14P62263 151 aaKnown RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 GALNT2Q10471 571 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 ZNF235Q14590 738 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 LBRQ14739 615 aaKnown RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 RPS6KA1Q15418 735 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 CST6Q15828 149 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 POM121L1PQ3SYA9 428 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 ATXN7L2Q5T6C5 722 aaPredicted RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 TMCO4Q5TGY1 634 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 TIGD7Q6NT04 549 aaPredicted RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 DPY19L3Q6ZPD9 716 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 FAM124AQ86V42 546 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 LRRC49Q8IUZ0 686 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 REXO1L1PQ8IX06 675 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 CHST14Q8NCH0 376 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 OR2A12Q8NGT7 310 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 OR6K2Q8NGY2 324 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 GRIN3AQ8TCU5 1115 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 LRRN4Q8WUT4 740 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 ISG20Q96AZ6 181 aaKnown RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 HES6Q96HZ4 224 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 EXOC2Q96KP1 924 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 GDAP1L1Q96MZ0 367 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 DTLQ9NZJ0 730 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 HECAQ9UBI9 543 aaPredicted RBP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 IL36AQ9UHA7 158 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 PYCARDQ9ULZ3 195 aa17.11■□□□□ 0.33
LSM14A-208ENST00000590416 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
LSM14A-208ENST00000590416 WDFY4Q6ZS81 3184 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms