RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 PRPSAP1Q14558 356 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 GRM3Q14832 879 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
PDE4A-207ENST00000590407 DLG2Q15700 870 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 CERCAMQ5T4B2 595 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 SYPL2Q5VXT5 272 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 SPATA24Q86W54 205 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 OSTM1Q86WC4 334 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 ANKRD13AQ8IZ07 590 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 SIX6OS1Q8N1H7 587 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 ZSCAN18Q8TBC5 510 aaPredicted RBP12.58□□□□□ -0.4
PDE4A-207ENST00000590407 PPP1R2P1Q96PQ5 205 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 GCNAQ96QF7 691 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 CDRT15Q96T59 188 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 NDNQ99608 321 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 TASP1Q9H6P5 420 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 CAB39LQ9H9S4 337 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 ELP3Q9H9T3 547 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 TMCO1Q9UM00 188 aa12.58□□□□□ -0.4
PDE4A-207ENST00000590407 COL4A4P53420 1690 aaPredicted RBP12.58□□□□□ -0.4
PDE4A-207ENST00000590407 TRPC5OSA6NMA1 111 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 CRTAMO95727 393 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 CLPTM1O96005 669 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 FYNP06241 537 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 SLC35E2BP0CK96 405 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 PTPN1P18031 435 aaKnown RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 XRCC1P18887 633 aaPredicted RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 PMLP29590 882 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 TKTL1P51854 596 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 KPNA2P52292 529 aaKnown RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 DAOAP59103 153 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 COG7P83436 770 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 APOFQ13790 326 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 CEACAM7Q14002 265 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 KIZQ2M2Z5 673 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 ARL13BQ3SXY8 428 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 GLRA4Q5JXX5 417 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 GJC2Q5T442 439 aaPredicted RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 CLEC20AQ6ZU45 233 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 PIWIL4Q7Z3Z4 852 aaKnown RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 ARHGAP22Q7Z5H3 698 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 TP53INP2Q8IXH6 220 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 KDM1BQ8NB78 822 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 OPTNQ96CV9 577 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 RCN3Q96D15 328 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 DUS3LQ96G46 650 aaKnown RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 FAR2Q96K12 515 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 GPR78Q96P69 363 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 SLC2A11Q9BYW1 496 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 RBM38Q9H0Z9 239 aaKnown RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 WDR55Q9H6Y2 383 aaPredicted RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 WDR41Q9HAD4 459 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 TMPRSS4Q9NRS4 437 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 IARS2Q9NSE4 1012 aaKnown RBP12.57□□□□□ -0.4
PDE4A-207ENST00000590407 ZDHHC2Q9UIJ5 367 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 SARDHQ9UL12 918 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 SLC39A10Q9ULF5 831 aa12.57□□□□□ -0.4
PDE4A-207ENST00000590407 SMIM35A0A1B0GVV1 85 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 TCAF2A6NFQ2 919 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 FAM72CH0Y354 149 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 TK2O00142 265 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 TRIM38O00635 465 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 TXNDC9O14530 226 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 USP12O75317 370 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 C8BP07358 591 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 MMP3P08254 477 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 SRGAP2BP0DMP2 458 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.46e-6■□□□□ 10.9
PDE4A-207ENST00000590407 NFKB1P19838 968 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 EPHA3P29320 983 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 BAG6P46379 1132 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 ZBTB17Q13105 803 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 OLIG2Q13516 323 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 ITGA7Q13683 1181 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 USP10Q14694 798 aaKnown RBP12.56□□□□□ -0.4
PDE4A-207ENST00000590407 TMEM259Q4ZIN3 620 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 RAB41Q5JT25 222 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 PCID2Q5JVF3 399 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 PPM1LQ5SGD2 360 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 ZNF618Q5T7W0 954 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 FAM72AQ5TYM5 149 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 FAM72DQ6L9T8 149 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 LRRC8EQ6NSJ5 796 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 PKN3Q6P5Z2 889 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 CHSY3Q70JA7 882 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 SATL1Q86VE3 508 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 FAM72BQ86X60 149 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 CENPLQ8N0S6 344 aaPredicted RBP12.56□□□□□ -0.4
PDE4A-207ENST00000590407 NPWQ8N729 165 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 RNF169Q8NCN4 708 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 ACVR1CQ8NER5 493 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
PDE4A-207ENST00000590407 ATXN7L3BQ96GX2 97 aa12.56□□□□□ -0.4
PDE4A-207ENST00000590407 CHRAC1Q9NRG0 131 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms