RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 AP4E1Q9UPM8 1137 aa18.4■□□□□ 0.54
CIRBP-227ENST00000590188 KCNK3O14649 394 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 ALOX15BO15296 676 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-227ENST00000590188 CD160O95971 181 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 SERPING1P05155 500 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 AFF3P51826 1226 aaKnown RBP18.39■□□□□ 0.53
CIRBP-227ENST00000590188 TPI1P60174 286 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 ARSIQ5FYB1 569 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 AGBL4Q5VU57 503 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 RYBPQ8N488 228 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-227ENST00000590188 RTL3Q8N8U3 475 aaKnown RBP18.39■□□□□ 0.53
CIRBP-227ENST00000590188 OR6K2Q8NGY2 324 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 TRIM11Q96F44 468 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 SNRNP25Q9BV90 132 aaKnown RBP18.39■□□□□ 0.53
CIRBP-227ENST00000590188 ISCUQ9H1K1 167 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 MAGEH1Q9H213 219 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 AASDHPPTQ9NRN7 309 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 IL36AQ9UHA7 158 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 SNX11Q9Y5W9 270 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 SCINQ9Y6U3 715 aa18.39■□□□□ 0.53
CIRBP-227ENST00000590188 PLXNA2O75051 1894 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 A0A1W2PPC4 97 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 LEFTY1O75610 366 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 RNF8O76064 485 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 TPM3P06753 285 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 MIPP30301 263 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 GKP32189 559 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 ETFBP38117 255 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 SEMA3BQ13214 749 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 TEAD4Q15561 434 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 KIF19Q2TAC6 998 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 HLA-BQ31612 363 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 VPS36Q86VN1 386 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 SYN2Q92777 582 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-227ENST00000590188 HMCESQ96FZ2 354 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 BTBD6Q96KE9 485 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 CAMK1GQ96NX5 476 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 KCTD15Q96SI1 283 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-227ENST00000590188 KLC2Q9H0B6 622 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 THAP2Q9H0W7 228 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 NOL6Q9H6R4 1146 aaKnown RBP18.38■□□□□ 0.53
CIRBP-227ENST00000590188 ZDHHC6Q9H6R6 413 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 CATSPERBQ9H7T0 1116 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 DYRK4Q9NR20 520 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 DNAAF2Q9NVR5 837 aaKnown RBP18.38■□□□□ 0.53
CIRBP-227ENST00000590188 HPCAL4Q9UM19 191 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 BZW2Q9Y6E2 419 aaKnown RBP18.38■□□□□ 0.53
CIRBP-227ENST00000590188 SPTBN2O15020 2390 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 CACNA1AO00555 2505 aa18.38■□□□□ 0.53
CIRBP-227ENST00000590188 A0A087X0T9 212 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 EEF2KO00418 725 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 WNT9AO14904 365 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 PLRG1O43660 514 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 BUB1O43683 1085 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 PRNPP04156 253 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 FAM228BP0C875 321 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 MYBL1P10243 752 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 CD59P13987 128 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 CSRP1P21291 193 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 CCNHP51946 323 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 AIF1P55008 147 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 SLC20A2Q08357 652 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 CARD16Q5EG05 197 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 KCNT1Q5JUK3 1230 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 PCDH20Q8N6Y1 951 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 KLK6Q92876 244 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 IQCDQ96DY2 449 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 CELF6Q96J87 481 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 ZDHHC5Q9C0B5 715 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 CEP44Q9C0F1 390 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 SLC32A1Q9H598 525 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 MRPL47Q9HD33 250 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 ARHGAP20Q9P2F6 1191 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 ANKRD6Q9Y2G4 727 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 FNDC3AQ9Y2H6 1198 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 WASF2Q9Y6W5 498 aa18.37■□□□□ 0.53
CIRBP-227ENST00000590188 ASCC3Q8N3C0 2202 aaKnown RBP18.37■□□□□ 0.53
CIRBP-227ENST00000590188 SPAARA0A1B0GVQ0 90 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 RASA4BC9J798 803 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 RASA4O43374 803 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 CBFA2T2O43439 604 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 KDELR3O43731 214 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 SH3BP5O60239 455 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 LRCH4O75427 683 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 GJB3O75712 270 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 CER1O95813 267 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 TCF4P15884 667 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 GRIA4P48058 902 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 CCR5P51681 352 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 C21orf59P57076 290 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 PPP6R3Q5H9R7 873 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-227ENST00000590188 CCDC122Q5T0U0 273 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 ATXN7L2Q5T6C5 722 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-227ENST00000590188 ERMARDQ5T6L9 678 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 PIP5KL1Q5T9C9 394 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 TMIEQ8NEW7 156 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 ARHGEF26Q96DR7 871 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms