RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 TNKS2Q9H2K2 1166 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 ITM2CQ9NQX7 267 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 UBA2Q9UBT2 640 aaPredicted RBP21.71■■□□□ 1.07
ATG4D-212ENST00000590096 SCML1Q9UN30 329 aa21.71■■□□□ 1.07
ATG4D-212ENST00000590096 SMG5Q9UPR3 1016 aaKnown RBP21.71■■□□□ 1.07
ATG4D-212ENST00000590096 PLXND1Q9Y4D7 1925 aa21.7■■□□□ 1.07
ATG4D-212ENST00000590096 A0A0U1RQJ8 604 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 MCF2LO15068 1137 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 PRAMEF11O60813 436 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 ADH1BP00325 375 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 IL1BP01584 269 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 LMNAP02545 664 aaKnown RBP21.7■■□□□ 1.06
ATG4D-212ENST00000590096 OXTRP30559 389 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 PSMD8P48556 350 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 TPMTP51580 245 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 ELF2Q15723 593 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 CST6Q15828 149 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 INO80DQ53TQ3 878 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-212ENST00000590096 FAM160A2Q8N612 972 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-212ENST00000590096 RNF25Q96BH1 459 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-212ENST00000590096 RNF157Q96PX1 679 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 USP36Q9P275 1121 aaKnown RBP21.7■■□□□ 1.06
ATG4D-212ENST00000590096 IPO11Q9UI26 975 aaKnown RBP21.7■■□□□ 1.06
ATG4D-212ENST00000590096 WDR87Q6ZQQ6 2873 aa21.7■■□□□ 1.06
ATG4D-212ENST00000590096 IGHV1OR15-9A0A0B4J2B8 117 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 GRID2IPA4D2P6 1211 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 C1QTNF3-AMACRE9PGA6 284 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 J3KR12 359 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 TMCC1O94876 653 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 C7P10643 843 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 IL10RBQ08334 325 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 LPAL2Q16609 132 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 CARD16Q5EG05 197 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 FAM46CQ5VWP2 391 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 NCBP2-AS2Q69YL0 99 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 SLC36A4Q6YBV0 504 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 KBTBD6Q86V97 674 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 KATNAL2Q8IYT4 538 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 ATPAF2Q8N5M1 289 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 RNF10Q8N5U6 811 aaKnown RBP21.69■■□□□ 1.06
ATG4D-212ENST00000590096 LRRC57Q8N9N7 239 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 OR2A12Q8NGT7 310 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 GANCQ8TET4 914 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 TM6SF2Q9BZW4 377 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 PABPC3Q9H361 631 aaKnown RBP21.69■■□□□ 1.06
ATG4D-212ENST00000590096 CD93Q9NPY3 652 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 GUCA1BQ9UMX6 200 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 NCKAP1Q9Y2A7 1128 aa21.69■■□□□ 1.06
ATG4D-212ENST00000590096 SPAG17Q6Q759 2223 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 SPTBN4Q9H254 2564 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 C3orf70A6NLC5 250 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-212ENST00000590096 MID1O15344 667 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 MFSD11O43934 449 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 NDUFS2O75306 463 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 ZNF821O75541 412 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-212ENST00000590096 PALMO75781 387 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 RHOBTB1O94844 696 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 BCKDHBP21953 392 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 CD6P30203 668 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 CHRNA3P32297 505 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 SLC8A1P32418 973 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 RHOAP61586 193 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 SNRPD1P62314 119 aaKnown RBP21.68■■□□□ 1.06
ATG4D-212ENST00000590096 PAFAH1B3Q15102 231 aaKnown RBP21.68■■□□□ 1.06
ATG4D-212ENST00000590096 PLK5Q496M5 336 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 ARHGAP36Q6ZRI8 547 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 RFX6Q8HWS3 928 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 LRRC49Q8IUZ0 686 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 TP53INP2Q8IXH6 220 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 RYBPQ8N488 228 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-212ENST00000590096 PQLC3Q8N755 202 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 FRMD1Q8N878 549 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 RBM41Q96IZ5 413 aaKnown RBP21.68■■□□□ 1.06
ATG4D-212ENST00000590096 PDLIM2Q96JY6 352 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 PDFQ9HBH1 243 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 IL36AQ9UHA7 158 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 MBD1Q9UIS9 605 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-212ENST00000590096 AMFRQ9UKV5 643 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 MYO15AQ9UKN7 3530 aa21.68■■□□□ 1.06
ATG4D-212ENST00000590096 APOL1O14791 398 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 ZRANB2O95218 330 aaKnown RBP eCLIP21.67■■□□□ 1.06
ATG4D-212ENST00000590096 GSRP00390 522 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 PRNPP04156 253 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 ZFXP17010 805 aaPredicted RBP21.67■■□□□ 1.06
ATG4D-212ENST00000590096 C5AR1P21730 350 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 CTNNA1P35221 906 aaKnown RBP21.67■■□□□ 1.06
ATG4D-212ENST00000590096 RPL6Q02878 288 aaKnown RBP21.67■■□□□ 1.06
ATG4D-212ENST00000590096 LAIR1Q6GTX8 287 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 MFSD7Q6UXD7 560 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 DPY19L3Q6ZPD9 716 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 USP30Q70CQ3 517 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 PEX26Q7Z412 305 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 FAM124AQ86V42 546 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 CCDC50Q8IVM0 306 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 PLPP6Q8IY26 295 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 RCOR2Q8IZ40 523 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 SUMF1Q8NBK3 374 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 OR2AP1Q8NGE2 309 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 PIP4K2CQ8TBX8 421 aa21.67■■□□□ 1.06
ATG4D-212ENST00000590096 NSMCE1Q8WV22 266 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms