RNA–Protein interactions for RNA: ENST00000589934.1

APBA3-204, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 2

Gene APBA3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-204	ENST00000589934	PSKH2	Q96QS6	385 aa		13.45	□□□□□ -0.26
APBA3-204	ENST00000589934	VAT1	Q99536	393 aa		13.45	□□□□□ -0.26
APBA3-204	ENST00000589934	TMEM245	Q9H330	911 aa		13.45	□□□□□ -0.26
APBA3-204	ENST00000589934	LHX3	Q9UBR4	397 aa		13.45	□□□□□ -0.26
APBA3-204	ENST00000589934	RNF103	O00237	685 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RIOK3	O14730	519 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	ZBTB24	O43167	697 aa	Predicted RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	ASL	P04424	464 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	HLA-DQB2	P05538	268 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	SRPRA	P08240	638 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	POLR2E	P19388	210 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RPL22	P35268	128 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RGR	P47804	291 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RENBP	P51606	427 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	STARD6	P59095	220 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	MRPS25	P82663	173 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	CCIN	Q13939	588 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	DHX34	Q14147	1143 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	PON2	Q15165	354 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	MLF2	Q15773	248 aa	Predicted RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	P3H1	Q32P28	736 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	ANKRD20A2	Q5SQ80	823 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	TMCO4	Q5TGY1	634 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	ANKRD20A1	Q5TYW2	823 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	EMC10	Q5UCC4	262 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	ANKRD20A3	Q5VUR7	823 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	HEATR6	Q6AI08	1181 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RETSAT	Q6NUM9	610 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	TSEN2	Q8NCE0	465 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	ARRDC2	Q8TBH0	407 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	CYB5D2	Q8WUJ1	264 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	CASKIN2	Q8WXE0	1202 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	SEC14L1	Q92503	715 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	ISG20	Q96AZ6	181 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RPL10L	Q96L21	214 aa	Known RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RUNDC3B	Q96NL0	473 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	MGME1	Q9BQP7	344 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	LRRC1	Q9BTT6	524 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	SP110	Q9HB58	689 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	UBA2	Q9UBT2	640 aa	Predicted RBP	13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	HPCAL4	Q9UM19	191 aa		13.44	□□□□□ -0.26
APBA3-204	ENST00000589934	SHROOM3	Q8TF72	1996 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	TBC1D3B	A6NDS4	549 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	TTI1	O43156	1089 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	GJB3	O75712	270 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	ZNF189	O75820	626 aa	Predicted RBP	13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	TMCC1	O94876	653 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	METTL18	O95568	372 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	EGF	P01133	1207 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	APOD	P05090	189 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	MMP2	P08253	660 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	C7	P10643	843 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	LMNB2	Q03252	620 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	PRKCQ	Q04759	706 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	NIPAL4	Q0D2K0	466 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	PTK6	Q13882	451 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	MARC1	Q5VT66	337 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	JAML	Q86YT9	394 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	PLPP6	Q8IY26	295 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	CCDC105	Q8IYK2	499 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	UBALD2	Q8IYN6	164 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	CCDC110	Q8TBZ0	833 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	ACOX2	Q99424	681 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	CEP41	Q9BYV8	373 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	CEP44	Q9C0F1	390 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	PCDH9	Q9HC56	1237 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	CD248	Q9HCU0	757 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	MUTYH	Q9UIF7	546 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	TRHDE	Q9UKU6	1024 aa		13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	FCF1	Q9Y324	198 aa	Known RBP	13.43	□□□□□ -0.26
APBA3-204	ENST00000589934	FAM187A	A6NFU0	413 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	SGK1	O00141	431 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	OPHN1	O60890	802 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	SLU7	O95391	586 aa	Known RBP	13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	ECEL1	O95672	775 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	KRT14	P02533	472 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	ATP5B	P06576	529 aa	Known RBP	13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	DRD1	P21728	446 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	CD72	P21854	359 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	MMP13	P45452	471 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	CSNK1D	P48730	415 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	GEMIN4	P57678	1058 aa	Known RBP	13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	DR1	Q01658	176 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	ZNF234	Q14588	700 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	PREPL	Q4J6C6	727 aa	Predicted RBP	13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	TJAP1	Q5JTD0	557 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	EGFLAM	Q63HQ2	1017 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	DUPD1	Q68J44	220 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	TPRG1	Q6ZUI0	275 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	PRPF39	Q86UA1	669 aa	Known RBP	13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	KCNV2	Q8TDN2	545 aa		13.42	□□□□□ -0.26
APBA3-204	ENST00000589934	USP33	Q8TEY7	942 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms