RNA–Protein interactions for RNA: ENST00000589843.1

AP001029.1-201, humanhuman

TSL 3 BASIC

Gene AP001029.1, Length 168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001029.1-201ENST00000589843 SETSIPP0DME0 302 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 KRT13P13646 458 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 CHRNA3P32297 505 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 MXI1P50539 228 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 MAPK10P53779 464 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 POLE2P56282 527 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 SULT2A1Q06520 285 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 KCNAB2Q13303 367 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 NCAPHQ15003 741 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 KRT39Q6A163 491 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 NEK5Q6P3R8 708 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 SCML4Q8N228 414 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 SH2D3CQ8N5H7 860 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 KYQ8NBH2 561 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 NAT6Q93015 286 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 FAM149B1Q96BN6 582 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 GFM1Q96RP9 751 aaKnown RBP13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 SLC17A9Q9BYT1 436 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 CPEB1Q9BZB8 566 aaKnown RBP13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 CLPBQ9H078 707 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 TNKS2Q9H2K2 1166 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 ZNF71Q9NQZ8 489 aaPredicted RBP13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 DYRK4Q9NR20 520 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 SEPT10Q9P0V9 454 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 ACSL6Q9UKU0 697 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 MAPK8IP1Q9UQF2 711 aa13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
AP001029.1-201ENST00000589843 M0QYV0 167 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 TPP1O14773 563 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 CALUO43852 315 aaPredicted RBP13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SNAP91O60641 907 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 ENDOD1O94919 500 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 APOEP02649 317 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 ANXA6P08133 673 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SRCP12931 536 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SYT1P21579 422 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 RRM1P23921 792 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 CASRP41180 1078 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 RPIAP49247 311 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SLC12A1Q13621 1099 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 MORC3Q14149 939 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 ARSIQ5FYB1 569 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 INTS8Q75QN2 995 aaKnown RBP13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 ERN2Q76MJ5 926 aaKnown RBP13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 PHACTR4Q8IZ21 702 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 OR2A12Q8NGT7 310 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SLC35F5Q8WV83 523 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 IRGQQ8WZA9 623 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 USP7Q93009 1102 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 RNF34Q969K3 372 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 ZSWIM1Q9BR11 485 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 STRADBQ9C0K7 418 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 RAB20Q9NX57 234 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SPASTQ9UBP0 616 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 PLEKHB1Q9UF11 243 aaPredicted RBP13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 VPS28Q9UK41 221 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 HS3ST3A1Q9Y663 406 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SDK2Q58EX2 2172 aa13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 SPENQ96T58 3664 aaKnown RBP13.24□□□□□ -0.29
AP001029.1-201ENST00000589843 CACNA1DQ01668 2161 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 TCAF2A6NFQ2 919 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 ENO4A6NNW6 628 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 C9orf172C9J069 976 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 NVLO15381 856 aaKnown RBP13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 YY2O15391 372 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 SMAD6O43541 496 aaKnown RBP13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 VDRP11473 427 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 TSHRP16473 764 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 BRD2P25440 801 aaKnown RBP13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 RABIFP47224 123 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 PLK1P53350 603 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 LRMPQ12912 555 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 EIF3IQ13347 325 aaKnown RBP13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 CUL2Q13617 745 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 LINGO4Q6UY18 593 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 DCP2Q8IU60 420 aaKnown RBP13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 TTC39CQ8N584 583 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 ATP11CQ8NB49 1132 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 FBXL13Q8NEE6 735 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 WDR48Q8TAF3 677 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 TMEM174Q8WUU8 243 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 GLMNQ92990 594 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 KLF6Q99612 283 aaPredicted RBP13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 PRMT1Q99873 361 aaKnown RBP13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 FEM1AQ9BSK4 669 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 SLC12A9Q9BXP2 914 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 MAGEF1Q9HAY2 307 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 SERTAD1Q9UHV2 236 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 GGT7Q9UJ14 662 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 ITM2BQ9Y287 266 aa13.23□□□□□ -0.29
AP001029.1-201ENST00000589843 CUTAO60888 179 aa13.22□□□□□ -0.29
AP001029.1-201ENST00000589843 NOS2P35228 1153 aa13.22□□□□□ -0.29
AP001029.1-201ENST00000589843 FOXD4L6Q3SYB3 417 aaPredicted RBP13.22□□□□□ -0.29
AP001029.1-201ENST00000589843 C8orf34Q49A92 452 aa13.22□□□□□ -0.29
AP001029.1-201ENST00000589843 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms