RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SLC8A2Q9UPR5 921 aa15.46■□□□□ 0.07
ATG4D-211ENST00000589753 ZNF148Q9UQR1 794 aa15.46■□□□□ 0.07
ATG4D-211ENST00000589753 DRG1Q9Y295 367 aaKnown RBP15.46■□□□□ 0.07
ATG4D-211ENST00000589753 MTF2Q9Y483 593 aaPredicted RBP15.46■□□□□ 0.07
ATG4D-211ENST00000589753 FAM170BA6NMN3 283 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 STK25O00506 426 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 KCNN4O15554 427 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 SMAD6O43541 496 aaKnown RBP15.45■□□□□ 0.06
ATG4D-211ENST00000589753 ATP9BO43861 1147 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 RNF40O75150 1001 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 NEBLO76041 1014 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 TMCC1O94876 653 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 JCHAINP01591 159 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 ITGAVP06756 1048 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 CHRNB1P11230 501 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 CHRNA3P32297 505 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 COILP38432 576 aaPredicted RBP15.45■□□□□ 0.06
ATG4D-211ENST00000589753 MMP13P45452 471 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 MRPS21P82921 87 aaKnown RBP15.45■□□□□ 0.06
ATG4D-211ENST00000589753 ZNF235Q14590 738 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 CYTH1Q15438 398 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 ACCSLQ4AC99 568 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 C2orf27AQ580R0 203 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 SERPINA13PQ6UXR4 307 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 ZNF572Q7Z3I7 529 aaPredicted RBP15.45■□□□□ 0.06
ATG4D-211ENST00000589753 TRMT11Q7Z4G4 463 aaKnown RBP15.45■□□□□ 0.06
ATG4D-211ENST00000589753 CHPFQ8IZ52 775 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 SYNPOQ8N3V7 929 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 TEX26Q8N6G2 289 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 SPATA4Q8NEY3 305 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 USP33Q8TEY7 942 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 CCDC114Q96M63 670 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 ACOX2Q99424 681 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 IL12RB2Q99665 862 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 CEP44Q9C0F1 390 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 MFSD1Q9H3U5 465 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 LMAN1LQ9HAT1 526 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 USP29Q9HBJ7 922 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 ZDHHC4Q9NPG8 344 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 SEPT3Q9UH03 358 aa15.45■□□□□ 0.06
ATG4D-211ENST00000589753 FCF1Q9Y324 198 aaKnown RBP15.45■□□□□ 0.06
ATG4D-211ENST00000589753 MUC22E2RYF6 1773 aaPredicted RBP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 TTC34A8MYJ7 566 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 RNF103O00237 685 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 STK10O94804 968 aaKnown RBP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 PTPN3P26045 913 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 STIP1P31948 543 aaKnown RBP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 IL12RB1P42701 662 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 KCNJ1P48048 391 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 FNTAP49354 379 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 RHOAP61586 193 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 LMNB2Q03252 620 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 WASHC5Q12768 1159 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 ZBTB17Q13105 803 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 DLG2Q15700 870 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 SDE2Q6IQ49 451 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 TTC27Q6P3X3 843 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 C22orf39Q6P5X5 142 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 CCDC137Q6PK04 289 aaKnown RBP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 TRIM67Q6ZTA4 783 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 KLHL7Q8IXQ5 586 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 CCDC105Q8IYK2 499 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 FAM71DQ8N9W8 422 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 ATL2Q8NHH9 583 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 ISG20Q96AZ6 181 aaKnown RBP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 VAT1Q99536 393 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 CEP41Q9BYV8 373 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 OSBPL6Q9BZF3 934 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 DDX47Q9H0S4 455 aaKnown RBP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 TMEM245Q9H330 911 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 HAUS2Q9NVX0 235 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 RBM22Q9NW64 420 aaKnown RBP eCLIP15.44■□□□□ 0.06
ATG4D-211ENST00000589753 CACNA2D2Q9NY47 1150 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 AMACRQ9UHK6 382 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 STON1Q9Y6Q2 735 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
ATG4D-211ENST00000589753 SGK1O00141 431 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 KLF8O95600 359 aaPredicted RBP15.43■□□□□ 0.06
ATG4D-211ENST00000589753 HLA-EP13747 358 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 NTSR1P30989 418 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 HSPA9P38646 679 aaKnown RBP15.43■□□□□ 0.06
ATG4D-211ENST00000589753 GDF10P55107 478 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 C2orf54Q08AI8 447 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 FZD5Q13467 585 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 ENPP2Q13822 863 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 HSF5Q4G112 596 aaPredicted RBP15.43■□□□□ 0.06
ATG4D-211ENST00000589753 TEX44Q53QW1 395 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 GSTA5Q7RTV2 222 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 ALLCQ8N6M5 410 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 PCDH20Q8N6Y1 951 aaKnown RBP15.43■□□□□ 0.06
ATG4D-211ENST00000589753 IL17RCQ8NAC3 791 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 TSEN2Q8NCE0 465 aaKnown RBP15.43■□□□□ 0.06
ATG4D-211ENST00000589753 MNS1Q8NEH6 495 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 FLCNQ8NFG4 579 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 PJA1Q8NG27 643 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 RPLP0P6Q8NHW5 317 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 GRK7Q8WTQ7 553 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 FRS2Q8WU20 508 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 RUNDC3BQ96NL0 473 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms