RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 URODP06132 367 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 ATF6P18850 670 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 TYK2P29597 1187 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 SKIV2L2P42285 1042 aaKnown RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 MAGEA12P43365 314 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 GJA8P48165 433 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 SERPINB8P50452 374 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 LIMK2P53671 638 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 SERINC3Q13530 473 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 CCDC153Q494R4 210 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 TEDDM1Q5T9Z0 273 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 MROH9Q5TGP6 573 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 RAP1GAP2Q684P5 730 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 FBXO46Q6PJ61 603 aaPredicted RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 ZNF783Q6ZMS7 281 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 OTOP3Q7RTS5 596 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 SETD3Q86TU7 594 aaPredicted RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 KCNMB4Q86W47 210 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 TMEM173Q86WV6 379 aaPredicted RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 MIB1Q86YT6 1006 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 CNTN4Q8IWV2 1026 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 TCEAL8Q8IYN2 117 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 NETO2Q8NC67 525 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 CALML6Q8TD86 181 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 USP33Q8TEY7 942 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 GIPC2Q8TF65 315 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 BCL7CQ8WUZ0 217 aaPredicted RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 SREK1Q8WXA9 508 aaKnown RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 ARMC5Q96C12 935 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 IMP4Q96G21 291 aaKnown RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 ZNF512Q96ME7 567 aaPredicted RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 FAM111AQ96PZ2 611 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 RBBP8Q99708 897 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 FSD1LQ9BXM9 530 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 TRIM55Q9BYV6 548 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 CRISPLD1Q9H336 500 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 FAM96AQ9H5X1 160 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 NOL6Q9H6R4 1146 aaKnown RBP10.56□□□□□ -0.72
VPS25-203ENST00000589520 ATP11BQ9Y2G3 1177 aa10.56□□□□□ -0.72
VPS25-203ENST00000589520 HMX2A2RU54 273 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 CFAP73A6NFT4 308 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 C2CD2LO14523 706 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 HNRNPCL1O60812 293 aaKnown RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 SIN3BO75182 1162 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 DNAJC8O75937 253 aaPredicted RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 TBX18O95935 607 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 PEX11BO96011 259 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 HLA-DQB2P05538 268 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 COL6A2P12110 1019 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 PFKLP17858 780 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 OR1E1P30953 314 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 PRKAA2P54646 552 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 EPHB3P54753 998 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 CERCAMQ5T4B2 595 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 ARHGAP36Q6ZRI8 547 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 KIAA0408Q6ZU52 694 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 RTL10Q7L3V2 364 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 STRA8Q7Z7C7 330 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 GALNT7Q86SF2 657 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 NUDCD3Q8IVD9 361 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 TTC9BQ8N6N2 239 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 CCDC63Q8NA47 563 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 SCG3Q8WXD2 468 aaKnown RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 IGSF8Q969P0 613 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 E2F7Q96AV8 911 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 HMCESQ96FZ2 354 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 C7orf26Q96N11 449 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 FCRL3Q96P31 734 aaPredicted RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 KLF6Q99612 283 aaPredicted RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 FAM167BQ9BTA0 163 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 TSSK1BQ9BXA7 367 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 POLR1EQ9GZS1 481 aaKnown RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 RASSF4Q9H2L5 321 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 RC3H2Q9HBD1 1191 aaKnown RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 CYP4F11Q9HBI6 524 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 MRPL17Q9NRX2 175 aaKnown RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 C20orf96Q9NUD7 363 aaPredicted RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 SIRPGQ9P1W8 387 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 SLC17A7Q9P2U7 560 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 ZNF212Q9UDV6 495 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 RIMKLBQ9ULI2 386 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 MAGED2Q9UNF1 606 aaPredicted RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 ANKRD6Q9Y2G4 727 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 MTO1Q9Y2Z2 717 aaKnown RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 TCAF1Q9Y4C2 921 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 PCDHB12Q9Y5F1 795 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 BRCA2P51587 3418 aa10.55□□□□□ -0.72
VPS25-203ENST00000589520 RANBP2P49792 3224 aaKnown RBP10.55□□□□□ -0.72
VPS25-203ENST00000589520 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 ILVBLA1L0T0 632 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 F5H423 210 aaPredicted RBP10.54□□□□□ -0.72
VPS25-203ENST00000589520 H0YHG0 523 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 UGT1A9O60656 530 aa10.54□□□□□ -0.72
VPS25-203ENST00000589520 PRAMEF11O60813 436 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms