RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 PGK1P00558 417 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 POLBP06746 335 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ERVK-10P10266 1014 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 NPY2RP49146 381 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 NFKB2Q00653 900 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 TIAL1Q01085 375 aaKnown RBP eCLIP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 TRAP1Q12931 704 aaKnown RBP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 CBX2Q14781 532 aaPredicted RBP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 POU5F2Q8N7G0 328 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 URGCPQ8TCY9 931 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ASB9Q96DX5 294 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 KCNK16Q96T55 309 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 LRRC40Q9H9A6 602 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 TMPRSS4Q9NRS4 437 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 HACD3Q9P035 362 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 CIDEBQ9UHD4 219 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ZNF639Q9UID6 485 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ZDHHC2Q9UIJ5 367 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 FBXW11Q9UKB1 542 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 CDH7Q9ULB5 785 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ZNF510Q9Y2H8 683 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 SDHDO14521 159 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 HDAC3O15379 428 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 NCAM2O15394 837 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 KITP10721 976 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 NRG1Q02297 640 aaPredicted RBP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 UGT3A2Q3SY77 523 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 CMC1Q7Z7K0 106 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 FBXO16Q8IX29 292 aaPredicted RBP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 NUP93Q8N1F7 819 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 PGLYRP2Q96PD5 576 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 SRCAPQ6ZRS2 3230 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 TDRD15B5MCY1 1934 aaKnown RBP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 XRCC1P18887 633 aaPredicted RBP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 RGS7P49802 495 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
KDM4B-208ENST00000589104 CBX3Q13185 183 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 PDK1Q15118 436 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ZNF618Q5T7W0 954 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 FAM45BPQ6NSW5 357 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ZNF683Q8IZ20 524 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 GOLM1Q8NBJ4 401 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.63□□□□□ -0.239e-8■■■■□ 25.4
KDM4B-208ENST00000589104 ZMIZ2Q8NF64 920 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 FAM45AQ8TCE6 357 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 IL12RB2Q99665 862 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 MROH8Q9H579 483 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 ARNT2Q9HBZ2 717 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 TNFRSF12AQ9NP84 129 aa13.63□□□□□ -0.23
KDM4B-208ENST00000589104 C7orf72A4D263 438 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 SLCO1B7G3V0H7 640 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 ZNF701M0R085 212 aaPredicted RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 HAS3O00219 553 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 TRIM13O60858 407 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 PDE5AO76074 875 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 C2P06681 752 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 MX2P20592 715 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 RPL5P46777 297 aaKnown RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 SFSWAPQ12872 951 aaKnown RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 LAMC2Q13753 1193 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 GK3PQ14409 553 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 MYLK3Q32MK0 819 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 NHSL2Q5HYW2 709 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CLEC20AQ6ZU45 233 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 ARHGAP12Q8IWW6 846 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CTAGE3PQ8IX95 158 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 NMD3Q96D46 503 aaKnown RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CLMNQ96JQ2 1002 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 ZFRQ96KR1 1074 aaKnown RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 UBXN10Q96LJ8 280 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 PPP1R10Q96QC0 940 aaKnown RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CENPKQ9BS16 269 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 PRDM12Q9H4Q4 367 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 ARMC1Q9NVT9 282 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 ARHGEF38Q9NXL2 777 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 THSD7BQ9C0I4 1608 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CHRNGP07510 517 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 THRAP10827 490 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 RGS2P41220 211 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 OSTNP61366 133 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 PFKPQ01813 784 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 KCNC4Q03721 635 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 SULT2A1Q06520 285 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 OLIG2Q13516 323 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 PEX6Q13608 980 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CDO1Q16878 200 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 SETD3Q86TU7 594 aaPredicted RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 ANKFN1Q8N957 763 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 C2CD4AQ8NCU7 369 aaPredicted RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 VAT1Q99536 393 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 EIF2AQ9BY44 585 aaKnown RBP13.62□□□□□ -0.23
KDM4B-208ENST00000589104 VTA1Q9NP79 307 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 TRHDEQ9UKU6 1024 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CCDC160A6NGH7 325 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 INO80B-WBP1J3KQ70 363 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 OR6B1O95007 311 aa13.62□□□□□ -0.23
KDM4B-208ENST00000589104 CXCR3P49682 368 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms