RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 MTA1Q13330 715 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 MTX1Q13505 466 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 BYSLQ13895 437 aaKnown RBP3.76□□□□□ -1.81
SMAD4-207ENST00000589076 GPR68Q15743 365 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 GXYLT1Q4G148 440 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 C10orf76Q5T2E6 689 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 SLC9C2Q5TAH2 1124 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 FAAH2Q6GMR7 532 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 AADACL2Q6P093 401 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 RBM44Q6ZP01 1051 aaKnown RBP3.76□□□□□ -1.81
SMAD4-207ENST00000589076 B4GALNT4Q76KP1 1039 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 MDGA2Q7Z553 956 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 VPS52Q8N1B4 723 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 OR52N4Q8NGI2 321 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 FAM110DQ8TAY7 271 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-207ENST00000589076 ZFPM2Q8WW38 1151 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 PIGKQ92643 395 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 HDAC2Q92769 488 aaKnown RBP3.76□□□□□ -1.81
SMAD4-207ENST00000589076 RNF125Q96EQ8 232 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 RNFT2Q96EX2 444 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 APOPT1Q96IL0 206 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 ADAD1Q96M93 576 aaKnown RBP3.76□□□□□ -1.81
SMAD4-207ENST00000589076 FCRL5Q96RD9 977 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 FUZQ9BT04 418 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 PHF7Q9BWX1 381 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-207ENST00000589076 TM2D2Q9BX73 214 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 NPLQ9BXD5 320 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-207ENST00000589076 ACAD9Q9H845 621 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 IL21RQ9HBE5 538 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 IRAK4Q9NWZ3 460 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 PPP1R14DQ9NXH3 145 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 MDFICQ9P1T7 246 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 HSF4Q9ULV5 492 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 ARHGAP26Q9UNA1 814 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 FAM90A7PA6NKC0 464 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 FAM90A22PA8MWA6 464 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 FAM90A12PA8MX19 464 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 FAM90A23PA8MXZ1 464 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 B4E171 279 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 INPPL1O15357 1258 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 SLC28A2O43868 658 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ZC3H11AO75152 810 aaKnown RBP eCLIP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 PLAUP00749 431 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ATP1A3P13637 1013 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 TFEBP19484 476 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 HNF1BP35680 557 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 TSPAN7P41732 249 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 STAT1P42224 750 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 PAFAH1B1P43034 410 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ALDH7A1P49419 539 aaKnown RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 SLC12A2P55011 1212 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 CASP6P55212 293 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 RPP30P78346 268 aaKnown RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 SEC23BQ15437 767 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 PLK5Q496M5 336 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 EARS2Q5JPH6 523 aaKnown RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 VWA5B1Q5TIE3 1220 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ACAD10Q6JQN1 1059 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 SLC30A9Q6PML9 568 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 RTL10Q7L3V2 364 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ADGRG6Q86SQ4 1221 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 KLBQ86Z14 1044 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ARMC8Q8IUR7 673 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 BRSK2Q8IWQ3 736 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 LSM14AQ8ND56 463 aaKnown RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 SLC25A28Q96A46 364 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ZUFSPQ96AP4 578 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 CADM1Q9BY67 442 aaKnown RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 AGXT2Q9BYV1 514 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 CTDSP1Q9GZU7 261 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 TTC12Q9H892 705 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 SEMA4BQ9NPR2 832 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 TLR8Q9NR97 1041 aaKnown RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 DECR2Q9NUI1 292 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 TMEM248Q9NWD8 314 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ARL15Q9NXU5 204 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-207ENST00000589076 TTC3P53804 2025 aa3.75□□□□□ -1.81
SMAD4-207ENST00000589076 GAGE10A6NGK3 116 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 TSPAN4O14817 238 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 CD4P01730 458 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 ST6GAL1P15907 406 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 HOXA7P31268 230 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-207ENST00000589076 GJC1P36383 396 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 PGGT1BP53609 377 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 CDH15P55291 814 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 GALNT2Q10471 571 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 SIM2Q14190 667 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-207ENST00000589076 NAA25Q14CX7 972 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 PRTGQ2VWP7 1150 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 SH2D4BQ5SQS7 431 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 CAPRIN2Q6IMN6 1127 aaKnown RBP3.74□□□□□ -1.81
SMAD4-207ENST00000589076 GJB7Q6PEY0 223 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 DSTYKQ6XUX3 929 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 TNIP2Q8NFZ5 429 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 RFWD2Q8NHY2 731 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 C2CD4CQ8TF44 421 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 ZBTB10Q96DT7 871 aa3.74□□□□□ -1.81
SMAD4-207ENST00000589076 NTPCRQ9BSD7 190 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms