RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 LATO43561 262 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CREB3O43889 395 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 KCNA4P22459 653 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CASP14P31944 242 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CSNK1EP49674 416 aaKnown RBP18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 POLD3Q15054 466 aaPredicted RBP18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 POM121L1PQ3SYA9 428 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 DPY19L3Q6ZPD9 716 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CYP4V2Q6ZWL3 525 aaPredicted RBP18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 VPS36Q86VN1 386 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ISG20Q96AZ6 181 aaKnown RBP18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PEBP4Q96S96 227 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 EBF2Q9HAK2 575 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 MRPL47Q9HD33 250 aaKnown RBP18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 GPATCH2LQ9NWQ4 482 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 AP4E1Q9UPM8 1137 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 FCF1Q9Y324 198 aaKnown RBP18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ACTL7AQ9Y615 435 aa18.32■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ASCC3Q8N3C0 2202 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CEP295Q9C0D2 2601 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 A0A087X0T9 212 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 A0A1B0GVT2 93 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 EIF3CLB5ME19 914 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 RNF103O00237 685 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 GIPC1O14908 333 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 FGF10O15520 208 aaPredicted RBP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 LRCH4O75427 683 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PRNPP04156 253 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 FAM228BP0C875 321 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CEACAM1P13688 526 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CD59P13987 128 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 HNRNPH3P31942 346 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 GEMIN4P57678 1058 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PPP2CBP62714 309 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PPP2CAP67775 309 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 SLC14A1Q13336 389 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TEAD4Q15561 434 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PIP5KL1Q5T9C9 394 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 IL27RAQ6UWB1 636 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 UMODL1-AS1Q8N2C9 162 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 EIF3CQ99613 913 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 SNRNP25Q9BV90 132 aaKnown RBP18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CATSPERBQ9H7T0 1116 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ARHGAP20Q9P2F6 1191 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 MYO1AQ9UBC5 1043 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 IL36AQ9UHA7 158 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 NENFQ9UMX5 172 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.31■□□□□ 0.524e-9■□□□□ 8
ATP6V0A1-220ENST00000588901 WASF2Q9Y6W5 498 aa18.31■□□□□ 0.52
ATP6V0A1-220ENST00000588901 KPNA3O00505 521 aaPredicted RBP18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CBFA2T2O43439 604 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 KDELR3O43731 214 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 RNF8O76064 485 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 MIPP30301 263 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 RECQLP46063 649 aaPredicted RBP18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 YBEYP58557 167 aaPredicted RBP18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TAS2R38P59533 333 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 RACK1P63244 317 aaKnown RBP18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CA9Q16790 459 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PARP15Q460N3 678 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 N4BP2L1Q5TBK1 243 aaPredicted RBP18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 SPECC1LQ69YQ0 1117 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 LAYNQ6UX15 382 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PSTKQ8IV42 348 aaKnown RBP18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PLPP6Q8IY26 295 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 DEFB124Q8NES8 71 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 GRIN3AQ8TCU5 1115 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ARRDC3Q96B67 414 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 SLC6A18Q96N87 628 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 THAP2Q9H0W7 228 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 IL21RQ9HBE5 538 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PCSK1NQ9UHG2 260 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 HPCAL4Q9UM19 191 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ANKRD6Q9Y2G4 727 aa18.3■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3DA0A087WVF3 549 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3IA0A087WXS9 549 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3EA0A087X179 549 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3KA0A087X1G2 549 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3FA6NER0 549 aaPredicted RBP18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ZSCAN5CA6NGD5 496 aaPredicted RBP18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3LB9A6J9 549 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PRPSAP2O60256 369 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 LEFTY1O75610 366 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CER1O95813 267 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3HP0C7X1 549 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ZNF883P0CG24 379 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 PCK1P35558 622 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CCNHP51946 323 aaPredicted RBP18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TPI1P60174 286 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TRIM14Q14142 442 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ACAP1Q15027 740 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 KIF19Q2TAC6 998 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 HLA-BQ31612 363 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 CARD16Q5EG05 197 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ARSIQ5FYB1 569 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 ERMARDQ5T6L9 678 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3GQ6DHY5 549 aa18.29■□□□□ 0.52
ATP6V0A1-220ENST00000588901 TBC1D3CQ6IPX1 549 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms