RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 NCAM1P13591 858 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 RAG1P15918 1043 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 ITGB8P26012 769 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 RAB27AP51159 221 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 TLE2Q04725 743 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 FPGSQ05932 587 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 TUBB3Q13509 450 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 SLC12A1Q13621 1099 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 ITGA9Q13797 1035 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 HERC3Q15034 1050 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 HSF5Q4G112 596 aaPredicted RBP14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 OTUD1Q5VV17 481 aaPredicted RBP14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 FSTL4Q6MZW2 842 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 TMEM154Q6P9G4 183 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 PAQR9Q6ZVX9 377 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 TMEM126BQ8IUX1 230 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 SMG8Q8ND04 991 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 CATSPER1Q8NEC5 780 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 TRPV1Q8NER1 839 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 PPHLN1Q8NEY8 458 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 FAM136AQ96C01 138 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 CCDC126Q96EE4 140 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 PRR11Q96HE9 360 aaPredicted RBP14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 HAPLN3Q96S86 360 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 FAM167BQ9BTA0 163 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 LRFN3Q9BTN0 628 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 KIFC1Q9BW19 673 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 S100A14Q9HCY8 104 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 WDR6Q9NNW5 1121 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 COX16Q9P0S2 106 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 SLC7A8Q9UHI5 535 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 TSC2P49815 1807 aa14.28□□□□□ -0.12
NEDD4L-223ENST00000588516 A0A087X1B8 175 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 C2orf71A6NGG8 1288 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 ZBTB24O43167 697 aaPredicted RBP14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 PEX1O43933 1283 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 NEBLO76041 1014 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 MYL3P08590 195 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 CLTBP09497 229 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 NCF2P19878 526 aaPredicted RBP14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 CPOXP36551 454 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 CPA2P48052 419 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 PSEN1P49768 467 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 BTKQ06187 659 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 SH2D4BQ5SQS7 431 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 SYPL2Q5VXT5 272 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 LIPMQ5VYY2 423 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 PM20D1Q6GTS8 502 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 ZYG11AQ6WRX3 759 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 SDCCAG8Q86SQ7 713 aaPredicted RBP14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 UNC5BQ8IZJ1 945 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 RNF34Q969K3 372 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 CNDP1Q96KN2 507 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 UROC1Q96N76 676 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 PANX3Q96QZ0 392 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 SORT1Q99523 831 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 GPR22Q99680 433 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 LPIN3Q9BQK8 851 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 ACBD6Q9BR61 282 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 CSNK1G1Q9HCP0 422 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 ENTPD7Q9NQZ7 604 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 OXSMQ9NWU1 459 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 ZDHHC7Q9NXF8 308 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 OR12D3Q9UGF7 316 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 TRPV2Q9Y5S1 764 aa14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.27□□□□□ -0.12
NEDD4L-223ENST00000588516 A0A088AWK7 358 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 ZCWPW2A0A1B0GU75 182 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 RGSL1A5PLK6 1076 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 TRPC5OSA6NMA1 111 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 KCNK1O00180 336 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 HDAC3O15379 428 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 ITM2AO43736 263 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 CACNG3O60359 315 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 C2P06681 752 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 COX4I1P13073 169 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 ABL2P42684 1182 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 RPL14P50914 215 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 CRADDP78560 199 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 MRPS6P82932 125 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 SOX4Q06945 474 aaPredicted RBP14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 LAMB3Q13751 1172 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 UBAP2LQ14157 1087 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 ZNF618Q5T7W0 954 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 ACBD5Q5T8D3 534 aaPredicted RBP14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 OLFML2BQ68BL8 750 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 SEL1L3Q68CR1 1132 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 ZFP1Q6P2D0 407 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 PGM2L1Q6PCE3 622 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 KIAA0408Q6ZU52 694 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 RAPH1Q70E73 1250 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 THEM5Q8N1Q8 247 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 FBXW8Q8N3Y1 598 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 TDRD5Q8NAT2 981 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 RP9Q8TA86 221 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 NPLOC4Q8TAT6 608 aa14.26□□□□□ -0.13
NEDD4L-223ENST00000588516 CALML6Q8TD86 181 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms