RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 DOCK4Q8N1I0 1966 aa17.33■□□□□ 0.37
TRIM47-203ENST00000586495 ZMPSTE24O75844 475 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 DKK1O94907 266 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 RHOQP17081 205 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 GLDCP23378 1020 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 MAPKAPK2P49137 400 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 SERPINH1P50454 418 aaKnown RBP17.33■□□□□ 0.36
TRIM47-203ENST00000586495 PTP4A2Q12974 167 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 CLEC16AQ2KHT3 1053 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 ARTNQ5T4W7 220 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 PIP5KL1Q5T9C9 394 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 RWDD4Q6NW29 188 aaKnown RBP17.33■□□□□ 0.36
TRIM47-203ENST00000586495 DPY19L3Q6ZPD9 716 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 ERN2Q76MJ5 926 aaKnown RBP17.33■□□□□ 0.36
TRIM47-203ENST00000586495 TMPRSS7Q7RTY8 843 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 PHF13Q86YI8 300 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-203ENST00000586495 GATAD2AQ86YP4 633 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 GALNT15Q8N3T1 639 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 CENPIQ92674 756 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-203ENST00000586495 ARRDC3Q96B67 414 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 PCDHB18PQ96TA0 734 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 TNKS2Q9H2K2 1166 aa17.33■□□□□ 0.36
TRIM47-203ENST00000586495 USP24Q9UPU5 2620 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 ANKRD62A6NC57 917 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 LDOC1O95751 146 aaPredicted RBP17.32■□□□□ 0.36
TRIM47-203ENST00000586495 GPD1P21695 349 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 RXRGP48443 463 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 GEMIN4P57678 1058 aaKnown RBP17.32■□□□□ 0.36
TRIM47-203ENST00000586495 TAS2R38P59533 333 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 RAB6CQ53S08 254 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 CARD16Q5EG05 197 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 ARSIQ5FYB1 569 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 MANEALQ5VSG8 457 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 CHST14Q8NCH0 376 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 C3orf20Q8ND61 904 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 GRIN3AQ8TCU5 1115 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 SAP25Q8TEE9 199 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 FAM172AQ8WUF8 416 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 TBC1D31Q96DN5 1066 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 HEPHQ9BQS7 1158 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 HDAC8Q9BY41 377 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 NAT10Q9H0A0 1025 aaKnown RBP17.32■□□□□ 0.36
TRIM47-203ENST00000586495 RAB6CQ9H0N0 254 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 MAGEH1Q9H213 219 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 TMEM248Q9NWD8 314 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 HPCAL4Q9UM19 191 aa17.32■□□□□ 0.36
TRIM47-203ENST00000586495 SIGLEC16A6NMB1 481 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 SRRM3A6NNA2 597 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-203ENST00000586495 LEFTY1O75610 366 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 GJB6O95452 261 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 PLEKP08567 350 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-203ENST00000586495 DESP17661 470 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 EPHA8P29322 1005 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-203ENST00000586495 RFC1P35251 1148 aaPredicted RBP17.31■□□□□ 0.36
TRIM47-203ENST00000586495 DNA2P51530 1060 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 NEK3P51956 506 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 HDAC4P56524 1084 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 ARF5P84085 180 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
TRIM47-203ENST00000586495 NCAPHQ15003 741 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 SHBQ15464 509 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 WDR59Q6PJI9 974 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 NLRP14Q86W24 1093 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 HORMAD1Q86X24 394 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 NTAN1Q96AB6 310 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 ISG20Q96AZ6 181 aaKnown RBP17.31■□□□□ 0.36
TRIM47-203ENST00000586495 KLHDC7BQ96G42 594 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 CNDP2Q96KP4 475 aaKnown RBP17.31■□□□□ 0.36
TRIM47-203ENST00000586495 AGPAT1Q99943 283 aa17.31■□□□□ 0.36
TRIM47-203ENST00000586495 TP53BP1Q12888 1972 aaPredicted RBP17.3■□□□□ 0.36
TRIM47-203ENST00000586495 A0A1W2PQU0 124 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 ENC1O14682 589 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 SLC31A1O15431 190 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 ZNF821O75541 412 aaPredicted RBP17.3■□□□□ 0.36
TRIM47-203ENST00000586495 LRIG2O94898 1065 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 PCDH8O95206 1070 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 CDK4P11802 303 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 FERP16591 822 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 AKT2P31751 481 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 TYRO3Q06418 890 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 SCAPQ12770 1279 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 CCDC157Q569K6 752 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 DNAJC24Q6P3W2 148 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 FBXL19Q6PCT2 694 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 MON1BQ7L1V2 547 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 SLFN11Q7Z7L1 901 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 SPATS2Q86XZ4 545 aaKnown RBP17.3■□□□□ 0.36
TRIM47-203ENST00000586495 PLPP6Q8IY26 295 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 AOPEPQ8N6M6 819 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 ARHGEF2Q92974 986 aaKnown RBP17.3■□□□□ 0.36
TRIM47-203ENST00000586495 DNAI1Q9UI46 699 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 FCF1Q9Y324 198 aaKnown RBP17.3■□□□□ 0.36
TRIM47-203ENST00000586495 PCDHGA1Q9Y5H4 931 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 WASF2Q9Y6W5 498 aa17.3■□□□□ 0.36
TRIM47-203ENST00000586495 SMTNL1A8MU46 457 aa17.29■□□□□ 0.36
TRIM47-203ENST00000586495 FAM72CH0Y354 149 aa17.29■□□□□ 0.36
TRIM47-203ENST00000586495 RAMP2O60895 175 aa17.29■□□□□ 0.36
TRIM47-203ENST00000586495 HNRNPA2B1P22626 353 aaKnown RBP17.29■□□□□ 0.36
TRIM47-203ENST00000586495 ITGB7P26010 798 aa17.29■□□□□ 0.36
TRIM47-203ENST00000586495 L1CAMP32004 1257 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms