RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 VEPH1Q14D04 833 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 CAMK4Q16566 473 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 PTPN21Q16825 1174 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 WDR72Q3MJ13 1102 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 PARP15Q460N3 678 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 FBXO43Q4G163 708 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 BOLA3Q53S33 107 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 INO80DQ53TQ3 878 aaPredicted RBP3.12□□□□□ -1.91
CCDC178-213ENST00000583930 FAM133BQ5BKY9 247 aaKnown RBP3.12□□□□□ -1.91
CCDC178-213ENST00000583930 TMEM196Q5HYL7 178 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 ZFYVE27Q5T4F4 411 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 SCARA3Q6AZY7 606 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 TRNP1Q6NT89 227 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 IGF2-ASQ6U949 168 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 GAREM2Q75VX8 874 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 DEFB128Q7Z7B8 93 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 RASSF3Q86WH2 238 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 NPAS3Q8IXF0 933 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 CMTM8Q8IZV2 173 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 ELMOD1Q8N336 334 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 FEZF2Q8TBJ5 459 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 MAIP1Q8WWC4 291 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 NKD2Q969F2 451 aaPredicted RBP3.12□□□□□ -1.91
CCDC178-213ENST00000583930 ASB2Q96Q27 587 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 RANBP9Q96S59 729 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 KCNJ15Q99712 375 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 CPEB1Q9BZB8 566 aaKnown RBP3.12□□□□□ -1.91
CCDC178-213ENST00000583930 DPEP3Q9H4B8 488 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 LRRC19Q9H756 370 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 NHEJ1Q9H9Q4 299 aaPredicted RBP3.12□□□□□ -1.91
CCDC178-213ENST00000583930 MRM3Q9HC36 420 aaKnown RBP3.12□□□□□ -1.91
CCDC178-213ENST00000583930 HOMER3Q9NSC5 361 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 AP5S1Q9NUS5 200 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 WHRNQ9P202 907 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 ZMYND8Q9ULU4 1186 aaPredicted RBP3.12□□□□□ -1.91
CCDC178-213ENST00000583930 EDARQ9UNE0 448 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 PLAAQ9Y263 795 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 HS3ST2Q9Y278 367 aa3.12□□□□□ -1.91
CCDC178-213ENST00000583930 TRAV19A0A0A6YYK7 116 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 TCRBV16S1A1N1A0A5B0 115 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 ILVBLA1L0T0 632 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 TARSL2A2RTX5 802 aaKnown RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CCDC66A2RUB6 948 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 GOLGA8IPA6NC78 632 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 GOLGA8JA6NMD2 632 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 MAN2B1O00754 1011 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 LRP3O75074 770 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 ZMPSTE24O75844 475 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 KRT37O76014 449 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 B3GAT3O94766 335 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 SUN1O94901 812 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 PEX11BO96011 259 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CAPNS1P04632 268 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 TPM1P09493 284 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 RALAP11233 206 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 LAMP2P13473 410 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 BRCC3P46736 316 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 OR1G1P47890 313 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CLCN5P51795 746 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CACNA2D1P54289 1103 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 DRG2P55039 364 aaKnown RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CDH4P55283 916 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 GEMIN4P57678 1058 aaKnown RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 YWHAZP63104 245 aaKnown RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 MRPS21P82921 87 aaKnown RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 COG7P83436 770 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 SULT2A1Q06520 285 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 GALNT2Q10471 571 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 SIM2Q14190 667 aaPredicted RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 BBS9Q3SYG4 887 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CCDC14Q49A88 953 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 MDH1BQ5I0G3 518 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 PPM1LQ5SGD2 360 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 LIN9Q5TKA1 542 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 PMF1Q6P1K2 205 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 OTOP2Q7RTS6 562 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 PIGZQ86VD9 579 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 SLC47A2Q86VL8 602 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 SCUBE1Q8IWY4 988 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 PPIL6Q8IXY8 311 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 ARFGAP1Q8N6T3 406 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 DTWD2Q8NBA8 298 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 RIN2Q8WYP3 895 aaPredicted RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 UTP4Q969X6 686 aaKnown RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 RPGRIP1Q96KN7 1286 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 SCLT1Q96NL6 688 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 FCRL3Q96P31 734 aaPredicted RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CPXM1Q96SM3 734 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 VAT1Q99536 393 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 FOXP3Q9BZS1 431 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 AKTIPQ9H8T0 292 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 ARNT2Q9HBZ2 717 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 ASAH2Q9NR71 780 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.11□□□□□ -1.91
CCDC178-213ENST00000583930 THEGQ9P2T0 379 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CEP83Q9Y592 693 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 PCDHB4Q9Y5E5 795 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 SNX9Q9Y5X1 595 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 CDY1Q9Y6F8 540 aa3.11□□□□□ -1.91
CCDC178-213ENST00000583930 BCLAF3A2AJT9 711 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms