RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 INPPL1O15357 1258 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 STRNO43815 780 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 RTN3O95197 1032 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 TBX18O95935 607 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 F9P00740 461 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 CHRM4P08173 479 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 CD63P08962 238 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 TMEM191BP0C7N4 346 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 CYP2A6P11509 494 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 RPS6KB1P23443 525 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 CHMP24386 653 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 AVPR2P30518 371 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 IDUAP35475 653 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 HNF1BP35680 557 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 SOX2P48431 317 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 NAP1L1P55209 391 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 NAA25Q14CX7 972 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 SEC23BQ15437 767 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 UBAP2Q5T6F2 1119 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 SLC9C2Q5TAH2 1124 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 VWA5B1Q5TIE3 1220 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 MTFR2Q6P444 385 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 INO80CQ6PI98 192 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 LRIG3Q6UXM1 1119 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 RBM44Q6ZP01 1051 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 RTL10Q7L3V2 364 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 MDGA2Q7Z553 956 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 CHSY1Q86X52 802 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 VPS52Q8N1B4 723 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 C5orf34Q96MH7 638 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 FRG2BQ96QU4 278 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 PHF7Q9BWX1 381 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 GATA5Q9BWX5 397 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 HDHD5Q9BXW7 423 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 CTDSP1Q9GZU7 261 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 ARL15Q9NXU5 204 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 FBXO40Q9UH90 709 aa4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 FBXO2Q9UK22 296 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-209ENST00000583441 C16orf96A6NNT2 1141 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 TNPO2O14787 897 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 KIF1CO43896 1103 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 PLAUP00749 431 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 FGBP02675 491 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 LCKP06239 509 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 T-ENOLP0DO92 83 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 LYL1P12980 280 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 CAPN3P20807 821 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 ABCD3P28288 659 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 SKIV2L2P42285 1042 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 CDH15P55291 814 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 MTA1Q13330 715 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 PRICKLE4Q2TBC4 344 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 Q4G0T1 1027 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 ZNF766Q5HY98 468 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 SLC30A9Q6PML9 568 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 RRM2BQ7LG56 351 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 TFAP2DQ7Z6R9 452 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 ADHFE1Q8IWW8 467 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 EXD3Q8N9H8 876 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 OSR1Q8TAX0 266 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 RAB40AQ8WXH6 277 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 CNOT9Q92600 299 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 ZBTB10Q96DT7 871 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 ADAD1Q96M93 576 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 ZNF347Q96SE7 839 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 IFT27Q9BW83 186 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 SLCO5A1Q9H2Y9 848 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 TMEM248Q9NWD8 314 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 TAS2R10Q9NYW0 307 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 SLC25A10Q9UBX3 287 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 SWAP70Q9UH65 585 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 ERRFI1Q9UJM3 462 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 DHDHQ9UQ10 334 aa4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 LAS1LQ9Y4W2 734 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-209ENST00000583441 TDRD9Q8NDG6 1382 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 A0A1W2PPH5 198 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 TEX22C9J3V5 150 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 RRHO14718 337 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 MSI1O43347 362 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 SMAD6O43541 496 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 PSMA4P25789 261 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 TYK2P29597 1187 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 CHRNA5P30532 468 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 MTNR1AP48039 350 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 CLNS1AP54105 237 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 RHAGQ02094 409 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 GALNT3Q14435 633 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 ZNF268Q14587 947 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 IL13RA2Q14627 380 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 DAZAP2Q15038 168 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 PLK5Q496M5 336 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 C5orf22Q49AR2 442 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 AWAT1Q58HT5 328 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 MZT2BQ6NZ67 158 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 SLC22A25Q6T423 547 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 CLEC4GQ6UXB4 293 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 C9orf47Q6ZRZ4 202 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 TBC1D1Q86TI0 1168 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 GALNT16Q8N428 558 aa4.02□□□□□ -1.77
SMCHD1-209ENST00000583441 C8orf58Q8NAV2 365 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms