RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ATP8B3O60423 1300 aa8.21□□□□□ -1.1
PPP4R1-225ENST00000583438 RP1P56715 2156 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 A0A087WV48 116 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 GOLGA6L7A0A1B0GV03 622 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 PLK4O00444 970 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 YEATS4O95619 227 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 PIK3CAP42336 1068 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 DPP6P42658 865 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 MATKP42679 507 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 CTSKP43235 329 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 NUMBP49757 651 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 DNAJC3Q13217 504 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 SMAD1Q15797 465 aaKnown RBP8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 FAM133BQ5BKY9 247 aaKnown RBP8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 KANSL1Q7Z3B3 1105 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 ANKS1BQ7Z6G8 1248 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 PIGZQ86VD9 579 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 UNC93AQ86WB7 457 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 ZDHHC13Q8IUH4 622 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 ZNF276Q8N554 614 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 CLEC4CQ8WTT0 213 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 PAGE5Q96GU1 130 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 MRGPRX3Q96LB0 322 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 SLC6A18Q96N87 628 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 DUSP16Q9BY84 665 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 ULBP1Q9BZM6 244 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 CUEDC2Q9H467 287 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 FBXO44Q9H4M3 255 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 FAM124BQ9H5Z6 455 aaPredicted RBP8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 PNPLA8Q9NP80 782 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 PRSS16Q9NQE7 514 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 SFMBT1Q9UHJ3 866 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 MAPK8IP1Q9UQF2 711 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 PCDHA5Q9Y5H7 936 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 U3KQE9 123 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 MAST4O15021 2626 aa8.2□□□□□ -1.1
PPP4R1-225ENST00000583438 COL6A6A6NMZ7 2263 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 LRP4O75096 1905 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 SCN8AQ9UQD0 1980 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 PVALEFA0A1B0GWK0 134 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 SLC12A8A0AV02 714 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 YJEFN3A6XGL0 299 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 E7ENQ6 273 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 RNF103O00237 685 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 EIF5BO60841 1220 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 EPHX1P07099 455 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 ITGB7P26010 798 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 CCNFP41002 786 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 SNRPFP62306 86 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 PPP2R5EQ16537 467 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 SGSM1Q2NKQ1 1148 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 CYP27C1Q4G0S4 372 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 CCDC157Q569K6 752 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 WDR45BQ5MNZ6 344 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 SYCP2LQ5T4T6 812 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 RFWD3Q6PCD5 774 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 MMS22LQ6ZRQ5 1243 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 STXBP4Q6ZWJ1 553 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 RABEPKQ7Z6M1 372 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 UBR7Q8N806 425 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 C19orf47Q8N9M1 422 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 IQUBQ8NA54 791 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 OR2T3Q8NH03 318 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 SNX19Q92543 992 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 PRCCQ92733 491 aaPredicted RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 OSBPL1AQ9BXW6 950 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 CIPCQ9C0C6 399 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 MMRN2Q9H8L6 949 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 ABCB8Q9NUT2 735 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 CLIC5Q9NZA1 410 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 MARCH2Q9P0N8 246 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 SUSD2Q9UGT4 822 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 XPO7Q9UIA9 1087 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 LSM7Q9UK45 103 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 TPX2Q9ULW0 747 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 APOBEC2Q9Y235 224 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 ANKRD6Q9Y2G4 727 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 R3HCC1Q9Y3T6 440 aaKnown RBP8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 CHD5Q8TDI0 1954 aa8.19□□□□□ -1.1
PPP4R1-225ENST00000583438 A0A1W2PR77 199 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 PRR19A6NJB7 356 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 CASC3O15234 703 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 FLRT2O43155 660 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 KLF4O43474 513 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 CLSTN1O94985 981 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 KIF20AO95235 890 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 SEMA4FO95754 770 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 CER1O95813 267 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 IGLV3-27P01718 113 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 FYNP06241 537 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 VAV1P15498 845 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 PDCP20941 246 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 ACADVLP49748 655 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 VAMP7P51809 220 aa8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 YWHAGP61981 247 aaKnown RBP eCLIP8.18□□□□□ -1.1
PPP4R1-225ENST00000583438 PPP2CBP62714 309 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms