RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 C22orf39Q6P5X5 142 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 OLFML1Q6UWY5 402 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 Q6ZSR6 202 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 ERN2Q76MJ5 926 aaKnown RBP16.53■□□□□ 0.24
SREBF1-221ENST00000583080 ZNF683Q8IZ20 524 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 FAM181AQ8N9Y4 354 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 C1orf131Q8NDD1 294 aaKnown RBP16.53■□□□□ 0.24
SREBF1-221ENST00000583080 ZNF548Q8NEK5 533 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-221ENST00000583080 TMIEQ8NEW7 156 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 IFI44Q8TCB0 444 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 MAPK15Q8TD08 544 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 PPP1R13BQ96KQ4 1090 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 SIK2Q9H0K1 926 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 DYRK4Q9NR20 520 aa16.53■□□□□ 0.24
SREBF1-221ENST00000583080 TRPM6Q9BX84 2022 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 A0A0D9SEW6 157 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 PMS2P1A4D2B8 440 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 POM121BA6NF01 834 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 A6NNZ2 444 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 CYSRT1A8MQ03 144 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 SCAMP1O15126 338 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 RAD51BO15315 384 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 ADCY5O95622 1261 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 PRNPP04156 253 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 ERBB2P04626 1255 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 TGM2P21980 687 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 UCNP55089 124 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 STX17P56962 302 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 ERVPABLB-1P60509 514 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 KRT83P78385 493 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 FZD2Q14332 565 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 ISXQ2M1V0 245 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 ARSIQ5FYB1 569 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 C3orf38Q5JPI3 329 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 EFHC1Q5JVL4 640 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 TPRG1LQ5T0D9 272 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 LSMEM2Q8N112 164 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 DCAF4L2Q8NA75 395 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 TTC9Q92623 222 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 BMFQ96LC9 184 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 CCDC114Q96M63 670 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 C2orf49Q9BVC5 232 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-221ENST00000583080 PIGVQ9NUD9 493 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 SATB2Q9UPW6 733 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 FARP1Q9Y4F1 1045 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-221ENST00000583080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
SREBF1-221ENST00000583080 WASF2Q9Y6W5 498 aa16.52■□□□□ 0.24
SREBF1-221ENST00000583080 MYO18BQ8IUG5 2567 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 M0QYT0 321 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 CASC3O15234 703 aaKnown RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 LZTS3O60299 673 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 ZNF821O75541 412 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 LEFTY1O75610 366 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 ENDOD1O94919 500 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 NME1P15531 152 aaKnown RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 USP8P40818 1118 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 MARSP56192 900 aaKnown RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 DRAP1Q14919 205 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 CDKN3Q16667 212 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 ARHGAP44Q17R89 818 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 PTPN20Q4JDL3 420 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 GUSBP11Q6P575 273 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 TRIM65Q6PJ69 517 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 CRTC1Q6UUV9 634 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 KYAT3Q6YP21 454 aaKnown RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 DPY19L3Q6ZPD9 716 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 C11orf57Q6ZUT1 292 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-221ENST00000583080 TFAP2DQ7Z6R9 452 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 IFT43Q96FT9 208 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 ATXN7L3BQ96GX2 97 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 HDAC8Q9BY41 377 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 ABCG4Q9H172 646 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 TMPRSS4Q9NRS4 437 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 THSD1Q9NS62 852 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 IL36AQ9UHA7 158 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 KLF15Q9UIH9 416 aa16.51■□□□□ 0.23
SREBF1-221ENST00000583080 NEMP2A6NFY4 417 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 KRT10P13645 584 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 DUSP3P51452 185 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-221ENST00000583080 NEK3P51956 506 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 HNRNPKP61978 463 aaKnown RBP eCLIP16.5■□□□□ 0.234e-13■■■■□ 20.7
SREBF1-221ENST00000583080 ARTNQ5T4W7 220 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 SLC26A9Q7LBE3 791 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 EFL1Q7Z2Z2 1120 aaKnown RBP16.5■□□□□ 0.23
SREBF1-221ENST00000583080 PARGQ86W56 976 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 OR7D4Q8NG98 312 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 WBP1Q96G27 269 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 TIGD1Q96MW7 591 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 DUSP23Q9BVJ7 150 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 TKTL2Q9H0I9 626 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 USP29Q9HBJ7 922 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 ARHGEF38Q9NXL2 777 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 MPP6Q9NZW5 540 aa16.5■□□□□ 0.23
SREBF1-221ENST00000583080 AJAP1Q9UKB5 411 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-221ENST00000583080 MAST4O15021 2626 aa16.49■□□□□ 0.23
SREBF1-221ENST00000583080 KIF26BQ2KJY2 2108 aa16.49■□□□□ 0.23
SREBF1-221ENST00000583080 SPTY2D1-AS1A0A0U1RR47 76 aa16.49■□□□□ 0.23
SREBF1-221ENST00000583080 BICDL2A1A5D9 508 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms