RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ACDQ96AP0 544 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 RUFY1Q96T51 708 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 FBRSL1Q9HCM7 1045 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 GDF3Q9NR23 364 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 OGFRQ9NZT2 677 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 CLEC4EQ9ULY5 219 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 EFR3BQ9Y2G0 817 aa13.8□□□□□ -0.2
CSNK1D-220ENST00000581737 CACNA1GO43497 2377 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 ILVBLA1L0T0 632 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 WASH4PA8MWX3 477 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 CNTN5O94779 1100 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 ECEL1O95672 775 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 ASLP04424 464 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 PYGMP11217 842 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 POLR2EP19388 210 aaKnown RBP13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 CD70P32970 193 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 MARCKSL1P49006 195 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 CDH6P55285 790 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 MRPS21P82921 87 aaKnown RBP13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 SULT2A1Q06520 285 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 HLTFQ14527 1009 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 GEN1Q17RS7 908 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 BEND6Q5SZJ8 279 aaPredicted RBP13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 CEP128Q6ZU80 1094 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 LONP2Q86WA8 852 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 VSIG1Q86XK7 387 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 KRT222Q8N1A0 295 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 KCTD6Q8NC69 237 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 FAM71BQ8TC56 605 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 WFDC5Q8TCV5 224 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 LRRC45Q96CN5 670 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 ZNF670Q9BS34 389 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 OSBPL8Q9BZF1 889 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 CIPCQ9C0C6 399 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 MUC3BQ9H195 1237 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 SMOC1Q9H4F8 434 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 PCDH18Q9HCL0 1135 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 EPB41L5Q9HCM4 733 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 ELOVL2Q9NXB9 296 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 ANGPTL2Q9UKU9 493 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 NEU3Q9UQ49 428 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 STARD13Q9Y3M8 1113 aa13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 MYO18AQ92614 2054 aaKnown RBP13.79□□□□□ -0.2
CSNK1D-220ENST00000581737 ZNF487B1APH4 448 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 K7EQS6 105 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 TRIM24O15164 1050 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 RAMP2O60895 175 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 RNF40O75150 1001 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 GOT1P17174 413 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CSKP41240 450 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 PLK1P53350 603 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 MESP2Q0VG99 397 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 PLEKHG6Q3KR16 790 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 TFDP3Q5H9I0 405 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 FSCBQ5H9T9 825 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 PITRM1Q5JRX3 1037 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 RNF219Q5W0B1 726 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 MBLAC2Q68D91 279 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 TXNRD3NBQ6F5E7 133 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 PKN3Q6P5Z2 889 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CCDC137Q6PK04 289 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 NLRP14Q86W24 1093 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 SPEM1Q8N4L4 309 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 BBOF1Q8ND07 529 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CAVIN3Q969G5 261 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 LMLNQ96KR4 655 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CSPG4P5Q96PW8 444 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 C2orf49Q9BVC5 232 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CALN1Q9BXU9 219 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 TSPYL1Q9H0U9 437 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 ARRDC1-AS1Q9H2J1 176 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 LRRC19Q9H756 370 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 POLR3BQ9NW08 1133 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 ZNF212Q9UDV6 495 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 MTRF1LQ9UGC7 380 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 VPS28Q9UK41 221 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 CHD5Q8TDI0 1954 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 ATG2BQ96BY7 2078 aa13.78□□□□□ -0.2
CSNK1D-220ENST00000581737 LAMA5O15230 3695 aa13.77□□□□□ -0.2
CSNK1D-220ENST00000581737 LRRD1A4D1F6 860 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 PRRT4C9JH25 899 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 AXIN1O15169 862 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 ZNF189O75820 626 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 PAPSS2O95340 614 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 DLDP09622 509 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 HNRNPLP14866 589 aaKnown RBP eCLIP13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 SERPINB6P35237 376 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 COILP38432 576 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 SEC13P55735 322 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 YBEYP58557 167 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 ST8SIA6P61647 398 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 SLC7A5Q01650 507 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 GNA12Q03113 381 aa13.77□□□□□ -0.21
CSNK1D-220ENST00000581737 CALCOCO2Q13137 446 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms